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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114615462
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCPLSAPTP PLVRFVRAPL PACVPPTLLP VLPAALCRAR VRAQEPEFSY GCAEGSCYPA  60
   61 TGDLLIGRAQ KLSVTSTCGL HKPEPYCIVS HLQEDKKCFI CNSQDPYHET LNPDSHLIEN 120
  121 VVTTFAPNRL KIWWQSENGV ENVTIQLDLE AEFHFTHLIM TFKTFRPAAM LIERSSDFGK 180
  181 TWGVYRYFAY DCEASFPGIS TGPMKKVDDI ICDSRYSDIE PSTEGEVIFR ALDPAFKIED 240
  241 PYSPRIQNLL KITNLRIKFV KLHTLGDNLL DSRMEIREKY YYAVYDMVVR GNCFCYGHAS 300
  301 ECAPVDGFNE EVEGMVHGHC MCRHNTKGLN CELCMDFYHD LPWRPAEGRN SNACKKCNCN 360
  361 EHSISCHFDM AVYLATGNVS GGVCDDCQHN TMGRNCEQCK PFYYQHPERD IRDPNFCERC 420
  421 TCDPAGSQNE GICDSYTDFS TGLIAGQCRC KLNVEGEHCD VCKEGFYDLS SEDPFGCKSC 480
  481 ACNPLGTIPG GNPCDSETGH CYCKRLVTGQ HCDQCLPEHW GLSNDLDGCR PCDCDLGGAL 540
  541 NNSCFAESGQ CSCRPHMIGR QCNEVEPGYY FATLDHYLYE AEEANLGPGI SIVERQYIQD 600
  601 RIPSWTGAGF VRVPEGAYLE FFIDNIPYSM EYDILIRYEP QLPDHWEKAV ITVQRPGRIP 660
  661 TSSRCGNTIP DDDNQVVSLS PGSRYVVLPR PVCFEKGTNY TVRLELPQYT SSDSDVESPY 720
  721 TLIDSLVLMP YCKSLDIFTV GGSGDGVVTN SAWETFQRYR CLENSRSVVK TPMTDVCRNI 780
  781 IFSISALLHQ TGLACECDPQ GSLSSVCDPN GGQCQCRPNV VGRTCNRCAP GTFGFGPGGC 840
  841 KPCECHLQGS VNAFCNPVTG QCHCFQGVYA RQCDRCLPGH WGFPSCQPCQ CNGHADDCDP 900
  901 VTGECLNCQD YTMGHNCERC LAGYYGDPII GSGDHCRPCP CPDGPDSGRQ FARSCYQDPV 960
  961 TLQLACVCDP GYIGSRCDDC ASGYFGNPSE VGGSCQPCQC HNNIDTTDPE ACDKETGRCL1020
 1021 KCLYHTEGEH CQFCRFGYYG DALRQDCRKC VCNYLGTVQE HCNGSDCQCD KATGQCLCLP1080
 1081 NVIGQNCDRC APNTWQLASG TGCDPCNCNA AHSFGPSCNE FTGQCQCMPG FGGRTCSECQ1140
 1141 ELFWGDPDVE CRACDCDPRG IETPQCDQST GQCVCVEGVE GPRCDKCTRG YSGVFPDCTP1200
 1201 CHQCFALWDV IIAELTNRTH RFLEKAKALK ISGVIGPYRE TVDSVERKVS EIKDILAQSP1260
 1261 AAEPLKNIGY LFEEAEKLIK DVTEMMAQVE VKLSDTTSQS NSTAKELDSL QTEAESLDNT1320
 1321 VKELAEQLEF IKNSDIRGAL DSITKYFQMS LEAEERVNAS TTEPNSTVEQ SALMRDRVED1380
 1381 VMMERESQFK EKQEEQARLL DELAGKLQSL DLSAAAEMTC GTPPGASCSE TECGGPNCRT1440
 1441 DEGEKKCGGP GCGGLVTVAH NAWQKAMDLD QDVLSALAEV EQLSKMVSEA KLRADEAKQS1500
 1501 AEDILLKTNA TKEKMDKSNE ELRNLIKQIR NFLTQDSADL DSIEAVANEV LKMEMPSTPQ1560
 1561 QLQNLTEDIR ERVESLSQVE VILQHSAADI ARAEMLLEEA KRASKSATDV KVTADMVKEA1620
 1621 LEEAEKAQVA AEKAIKQADE DIQGTQNLLT SIESETAASE ETLFNASQRI SELERNVEEL1680
 1681 TRKAAQNSGE AEYIEKVVYT VKQSAEDVKK TLDGELDEKY KKVENLIAKK TEESADARRK1740
 1741 AEMLQNEAKT LLAQANSKLQ LLKDLERKYE DNQRYLEDKA QELARLEGEV RSLLKDISQK1800
 1801 VAVYSTCL

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