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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114615050
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRVLLCWA SLAAALEETL LNTKLETADL KWVTFPQVDG QVDTVAAEHL TRKRPGAEAT  60
   61 GKVNVKTLRL GPLSKAGFYL AFQDQGACMA LLSLHLFYKK CAQLTVNLTR FPETVPRELV 120
  121 VPVAGSCVVD AVPAPGPSPS LYCREDGQWA EQPVTGCSCA PGFEAAEGNT KCRACAQGTF 180
  181 KPLSGEGSCQ PCPANSHSNT IGSAVCQCRV GYFRARTDPR GAPCTTPPSA PRSVVSRLNG 240
  241 SSLHLEWSAP LESGGREDLT YALRCRECRP GGSCAPCGGD LTFDPGPRDL VEPWVVVRGL 300
  301 RPDFTYTFEV TALNGVSSLA TGPVPFEPVN VTTDREVPPA VSDIRVTRSS PSSLSLAWAV 360
  361 PRAPSGAVLD YEVKYHEKGA EGPSSVRFLK TSENRAELRG LKRGASYLVQ VRARSEAGYG 420
  421 PFGQEHHSQT QLDESEGWRE QLALIAGTAV VGVVLVLVVI VVAVLCLRKQ SNGREAEYSD 480
  481 KHGQYLIGHG TKVYIDPFTY EDPNEAVREF AKEIDVSYVK IEEVIGAGEF GEVCRGRLKA 540
  541 PGKKESCVAI KTLKGGYTER QRREFLSEAS IMGQFEHPNI IRLEGVVTNS MPVMILTEFM 600
  601 ENGALDSFLR LNDGQFTVIQ LVGMLRGIAS GMRYLAEMSY VHRDLAARNI LVNSNLVCKV 660
  661 SDFGLSRFLE ENSSDPTYTS SLGGKIPIRW TAPEAIAFRK FTSASDAWSY GIVMWEVMSF 720
  721 GERPYWDMSN QDVINAIEQD YRLPPPPDCP TSLHQLMLDC WQKDRNARPR FPQVVSALDK 780
  781 MIRNPASLKI VARENGGASH PLLDQRQPHY SAFGSVGEWL RAIKMGRYEE SFAAAGFGSF 840
  841 ELVSQISAED LLRIGVTLAG HQKKILASVQ HMKSQAKPGT PGGTGGPAPQ Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle