YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114613267
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSEECLCLA APIWEVRSAS ARPPPHLGSE ERLCLTAHCL GCEERLCPAA PSGRLGRLVK  60
   61 GRERVTIGAG GPPPRAVCKN KQPLGRRCRG GGVWLEGGAR LNSRWGSNQQ DKRALATAAR 120
  121 GGHGVLSGSG GGGRCCESGG GGAGRQREGA RPSGGGVGAE NMFPVGRIHR HLKTRTTSHG 180
  181 RVGATAAVYS AAILEYLTAE VLELAGNASK DLKVKRITPR HLQLAIRGDE ELDSLIKATI 240
  241 AGGGVIPHIH KSLIGKKGQQ KTA

Type	Start	End	Confidence
Signal Peptide	1	18	0.52
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	263	0.97