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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114612080
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVPCRALA VPGRLAGATE PVAAQQQRRH SQALGHEAAH LQRAELLTSV RLACRMVSSG  60
   61 QPGSSSGLAS LRATPSYQGG SDGTWVPEGP RNTASMSPSF PGGTWGGACR KDHVTCSRAA 120
  121 CPAPDTEVPI VSEMQASVRG AASWALWSAA EGAWRPRPPN KGAGAPPRGP ATHLPGPRSG 180
  181 LSSTATMTAN GTAEAVQIQF GLINCGNKYL TAEAFGFKVN ASASSLKKKQ IWTLEQPPDE 240
  241 AGSAAVCLRS HLGRYLAADK DGNVTCEREV PGPDCRFLIV AHDDGRWSLQ SEAHRRYFGG 300
  301 TEDRLSCFAQ TVSPAEKWSV HIAMHPQVNI YSVTRKRYAH LSARPADEIA VDRDVPWGVD 360
  361 SLITLAFQDQ RYSVQTADHR FLRHDGRLVA RPEPATGYTL EFRSGKVAFR DCEGRYLAPS 420
  421 GPSGTLKAGK ATKVGKDELF ALEQSCAQVV LQAANERNVS TRQGMDLSAN QDEETDQETF 480
  481 QLEIDRDTKK CAFRTHTGKY WTLTATGGVQ STASSKNASC YFDIEWRDRR ITLRASNGKF 540
  541 VTSKKNGQLA ASVETAGDSE LFLMKLINRP IIVFRGEHGF IGCRKVTGTL DANRSSYDVF 600
  601 QLEFNDGAYN IKGRFSYSTG KYWTVGSDSA VTSSGDTPVD FFFEFCDYNK VAIKVGGRYL 660
  661 KGDHAGVLKA SAETVDPASL WEY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle