YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114609843
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLAHPKMIQ LFKQTEFLQI LYTGPAGQDA GLWVIDPQVK GYQSHYSEAG RVSEIFSFFF  60
   61 CPSLFLGAAY GGGSHLLLGI LAALRPLVKP KIVKKRTKKF IWHQSDRYVK IKRNWWKPRG 120
  121 VDNRVRRRFR VQILMPNIDY GSNKKTKHML PSGFRKFLVH NVKELEVQQS YCAGIAHNVS 180
  181 SKNCKAIVER AAQLAIRVIN PNARLRSKEN E

Type	Start	End	Confidence
Non-Cytoplasmic	1	63	0.60
Transmembrane Helix	64	88	0.77
Cytoplasmic	89	211	0.77