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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114609189
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQHDEHCAQ MMDKQTRIQH EVSATPSPGQ LLHMTSALSS FGASLFITCF RGNYNTFWKI  60
   61 ISIGPTPHFA GSSRIQDLIS TQCSTYCLKL PQHKTRLRME NLTNFYERPG PPARPRLSRD 120
  121 PLGSAPDRPA RVGGGGREVP RGPRRLPGQS RINHPGDPCR GQRRINSPTP NSACRFSALG 180
  181 LSHGFDRPPH RGSRLPRASR PRDLPAAGRA PPRLRFPPAV RLVLAGPRRR VPCCSTRCHS 240
  241 PAGRRARPPE PRRGCGTAGQ RAQPSLGKKQ QSQRGDGERA KLTSLPPTLR PSCPEGLQPA 300
  301 VCRACLCARG AAPGRRPGAE LFPQGGSAAQ PRGSGGLATQ DPAPQPRTPS GGEVWLLSGA 360
  361 APDHWTAGAM PVGGLLPLFS SPAGGGLGGG LGGGGGRKGS GPAALRLTEK FVLLLVFSAF 420
  421 ITLCFGAIFF LPDSSKLLSG VLFHSSPALQ PDADHKPGPG ARAEDAAEGR ARRREEGAPG 480
  481 DPEAALEDNL ARIRENHERA LREAKETLQK LPEEIQRDIL LEKKKVARDQ LRDKAPFRGL 540
  541 PPVDFVPPIG VESREPADAA IREKRAKIKE MMKHAWNNYK GYAWGLNELK PISKGGHSSS 600
  601 LFGNIKGATI VDALDTLFIM EMKHEFEEAK SWVEENLDFN VNAEISVFEV NIRFVGGLLS 660
  661 AYYLSGEEIF RKKAVELGVK LLPAFHTPSG IPWALLNMKS GIGRNWPWAS GGSSILAEFG 720
  721 TLHLEFMHLS HLSGNPIFAE KVMNIRTVLN KLEKPQGLYP NYLNPSSGQW GQHHVSVGGL 780
  781 GDSFYEYLLK AWLMSDKTDL EAKKMYFDAV QAIETHLIRK SSSGLTYIAE WKGGLLEHKM 840
  841 GHLTCFAGGM FALGADAAPE GMAQHYLELG AEIARTCHES YNRTFMKLGP EAFRFDGGVE 900
  901 AIATRQNEKY YILRPEVMET YMYMWRLTHD PKYRKWAWEA VEALEKHCRV NGGYSGLRDV 960
  961 YLLHESYDDV QQSFFLAETL KYLYLIFSDD DLLPLEHWIF NSEAHLLPIL PKDKKEVEIR1020
 1021 EE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle