YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114608148, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTQDSEVVP VPAWPFSLVV FSCGGCWSVT AKMLRNLLAL RQIGQRTIST ASRRHFKNKV  60
   61 PEKQKLFQED DEIPLYLKGG VADALLYRAT MILTVGGAAY AIYELAVASF PKKQE

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.77
Transmembrane Helix	12	31	0.88
Cytoplasmic	32	83	0.81
Transmembrane Helix	84	103	0.67
Non-Cytoplasmic	104	115	0.53