YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114608124
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRAHLSRW RVNPPRLCIG PVWVDPDPKW PFPSRPELRF SVGIWSLPAG GLCGAGRSCT  60
   61 TRALAHPYFP RPETRNAVGL PELFRVLFVI ETVSECGVLI FIYGWPFLQT LAMLLIGTVS 120
  121 FHLRIRRNRE RNSRSGKTRC RSKRSEQSMD MGTSALSKKP WWTLPQNFHA PMVFHMEEDQ 180
  181 EELIFGHGDT YLRCIEVHSH TLIQLESWFT ATGQTRVTVV GPHRARQWLL HMFCCVGSQD 240
  241 SYHHARGLEM LERVRSQPLT NDDLVTSISV PPYTGDLSLA PRISGTVCLS VPQPSPYQVI 300
  301 GCSGFHLSSL YP

Type	Start	End	Confidence
Cytoplasmic	1	41	0.72
Transmembrane Helix	42	60	0.68
Non-Cytoplasmic	61	101	0.56
Transmembrane Helix	102	125	0.82
Cytoplasmic	126	312	0.92