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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114607584
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPDPKWALA GPCPLGSRGL LWVLHFAAST LLPVGTEGGN GQRPTPSGPN LINGLMSGLD  60
   61 PSSPSRYDLA SCVDALRERT CPLGALCSLG SPGAHWKYFQ REPPRGSLSL ADSREPWGWG 120
  121 RREVRRGPGP CPIPPRGAEG VMSPGPRAPW RASGPTAPRF CVLAGSPHSG GLVSVNEWKR 180
  181 MELVDTGPKG CRSEVGGKKA NQLEKGLDVP ASERVAGWGR CKNPAPAAAG EAEPRGEGAG 240
  241 PPRQAWKLLE MPQCRRRAFR RMPAKSPRQP RPAPSPYAEL PLSANPPPFL YSCESRDLGL 300
  301 PKMPEEVHHG EEEVETFAFQ AEIAQLMSLI INTFYSNKEI FLRELISNAS DALDKIRYES 360
  361 LTDPSKLDSG KELKIDIIPN PQERTLTLVD TGIGMTKADL INNLGTIAKS GTKAFMEALQ 420
  421 AGADISMIGQ FGVGFYSAYL VAEKVVVITK HNDDEQYAWE SSAGGSFTVR ADHGEPIGRG 480
  481 TKVILHLKED QTEYLEERRV KEVVKKHSQF IGYPITLYLE KEREKEISDD EAEEEKGEKE 540
  541 EEDKDDEEKP KIEDVGSDEE DDSGKDKKKK TKKIKEKYID QEELNKTKPI WTRNPDDITQ 600
  601 EEYGEFYKSL TNDWEDHLAV KHFSVEGQLE FRALLFIPRR APFDLFENKK KKNNIKLYVR 660
  661 RVFIMDSCDE LIPEYLNFIR GVVDSEDLPL NISREMLQQS KILKVIRKNI VKKCLELFSE 720
  721 LAEDKENYKK FYEAFSKNLK LGIHEDSTNR RRLSELLRYH TSQSGDEMTS LSEYVSRMKE 780
  781 TQKSIYYITG ESKEQVANSA FVERVRKRGF EVVYMTEPID EYCVQQLKEF DGKSLVSVTK 840
  841 EGLELPEDEE EKKKMEESKA KFENLCKLMK EILDKKVEKV TISNRLVSSP CCIVTSTYGW 900
  901 TANMERIMKA QALRDNSTMG YMMAKKHLEI NPDHPIVETL RQKAEADKND KAVKDLVVLL 960
  961 FETALLSSGF SLEDPQTHSN RIYRMIKLGL GIDEDEVAAE EPSAAVPDEI PPLEGDEDAS1020
 1021 RMEEVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle