YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114605891
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSCTVVPKA GQGLLTAPCS GCGLAVARGG QGLPVHREAS SRERVRMEPE GGATNSFVAP  60
   61 GGRFSAWPPG DPKTPAPEES PGDLLPAPPN SGQTQSQAGK TGVLRTPRLR RPPGLSAGFL 120
  121 SQARPSQAAG PGRRAQRFRR PLSPATLIPR RVQPGARGTQ APGLASRSAN TEAHKDGALR 180
  181 EQIRIAPRPS QATEARRGDS RRIYTLNFEL SEELAVTLSL AWTGIRSEVV AFYDVQALKS 240
  241 AVYVLHHPLH VLKFRIIFAG SHVVLAAHMH SFLRPPLKGA TFSQEELRLS SQQLPNGLNG 300
  301 APMTQISLAS QEVSQNLQVW FYRQGSMTEK SGISDHPRAP RGLGSRRPQR GSITLAWTRS 360
  361 GASARRSPAV GRWGDDNKKK SSGRGFAGEG GDGGRQGRGG GHLRRDLWRR EPSDPAHERL 420
  421 AGPGGRLAAH SREPRGPPRS SAAAPFPHGD SALNEQEKEL QRRLKRLYPA VDEQETPLPR 480
  481 SWSPKDKFSY IGLSQNNLRV HYKGHGKTPK DAASVRATHP IPAACGIYYF EVKIVSKGRD 540
  541 GYMGIGLSAQ GVNMNRLPGW DKHSYGYHGD DGHSFCSSGT GQPYGPTFTT GDVIGCCVNL 600
  601 INNTCFYTKN GHSLGIAFTD LPPNLYPTVG LQTPGEVVDA NFGQHPFVFD IEDYMREWRT 660
  661 KIQAQIDRFP IGDREGEWQT MIQKMVSSYL VHHGYCATAE AFARSTDQTV LEELASIKNR 720
  721 QRIQKLVLAG RMGEAIETTQ QLYPSLLERN PNLLFTLKVR QFIEMVNGTD SEVRCLGGRS 780
  781 PKSQDSYPVS PRPFSSPSMS PSHGMNIHNL ASGKGSTAHF SGFESCSNGV ISNKAHQSYC 840
  841 HSNKHQSSNL NVPELNSINM SRSQQVNNFT SNDVDMETDH YSNGVGETSS NGFLNGSSKH 900
  901 DHEMEDCDTE MEVDSSQLRR QLCGGSQAAI ERMIHFGREL QAMSEQLRRD CGKNTANKKM 960
  961 LKDAFSLLAY SDPWNSPVGN QLDPIQREPV CSALNSAILE THNLPKQPPL ALAMGQATQC1020
 1021 LGLMARSGIG SCAFATVEDY LH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle