YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114599711
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METSATRAGS QVVATTARHS AAYRADPLRV SSRDKLTEMA ASSQGNIEGN FESLDLTEFA  60
   61 KKQPWWRKLF GQESGPSAEK YSMATQLFIG GVTGWCTGFI FQKVGKLAAT AVGGGFSLLQ 120
  121 LANHTGYIKV DWQRVEKDMK KAKEQLKIRK SNQIPTEVRS KAEEVVSFVK KNVLVTGGFF 180
  181 GGFLLGMAS

Type	Start	End	Confidence
Cytoplasmic	1	82	0.61
Transmembrane Helix	83	101	0.41
Non-Cytoplasmic	102	107	0.61
Transmembrane Helix	108	127	0.36
Cytoplasmic	128	167	0.63
Transmembrane Helix	168	187	0.52
Non-Cytoplasmic	188	189	0.72