YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114600517
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLPNSNGA AAGRDFKMKL WDVVAVCLVL LHTASAFPLP AGKRPPEAPA EDRSLGRRRA  60
   61 PFALSSDSNM PEDYPDQFDD VMDFIQATIK RLKRSPDKQM AVLPRRERNR QAAAANPENS 120
  121 RGKGRRGQRG KNRGCVLTAI HLNVTDLGLG YETKEELIFR YCSGSCDAAE TTYDKILKNL 180
  181 SRNRRLVSDK VGQACCRPIA FDDDLSFLDD NLVYHILRKH SAKRCGCI

Type	Start	End	Confidence
Signal Peptide	1	36	0.83
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	228	0.99