YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114603543
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSFSRHIR ALSALQDCTG ILGLLSSPNL SRSFRRLNGK SDLYRQSLGQ FRRVTVRTGQ  60
   61 ERRGGGKMAA PEERDLTQEQ TEKLLQFQDL TGIESMDQCR HTLEQHNWNI EAAVQDRLNE 120
  121 QEGVPSVFNP PPSRPLQVNT ADHRIYSYVV SRPQPRGLLG WGYYLIMLPF RFTYYTILDI 180
  181 FRFALRFIRP DPRSRVTDPV GDIVSFMHSF EEKYGRAHPV FYQGTYSQAL NDAKRELRFL 240
  241 LVYLHGDDHQ DSDEFCRNTL CAPEVISLIN TRMLFWACST NKPEGYRVSQ ALRENTYPFL 300
  301 AMIMLKDRRM TVVGRLEGLI QPDDLINQLT FIMDANQTYL VSERLEREER NQTQVLRQQQ 360
  361 DEAYLASLRA DQEKERKKRE ERERKRRKEE EVQQQKLAEE RRRRNLQEEK ERKLECLPPE 420
  421 PSPDDPESVK IIFKLPNDSR VERRFHFSQS LTVIHDFLFS LKESPEKFQI EANFPRRVLP 480
  481 CIPSEEWPNP PTLQEAGLSH TEVLFVQDLT DE

Type	Start	End	Confidence
Signal Peptide	1	33	0.64
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	512	0.94