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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114596047
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLLLFALL WMVEGVFSQL HYTVQEEQEH GTFVGNIAED LGLDITKLSA RGFQTVPNSR  60
   61 TPYLDLNLET GVLYVNEKID REQICKQSPS CVLHLEVFLE NPLELFQVEI EVLDINDNPP 120
  121 SFPEPDLTVE ISESATPGTR FPLESAFDPD VGTNSLRDYE ITPNSYFSLD VQTQGDGNRF 180
  181 AELVLEKPLD REQQAVHRYV LTAVDGGAGL PPQQQRTGTA LLTIRVLDSN DNVPAFDQPV 240
  241 YTVSLPENSP PGTLVIQLNA TDPDEGQNGE VVYSFSSHIS PRARELFGLS PRTGRLEVSG 300
  301 ELDYEESPVY QVYVQAKDLG PNAVPAHCKV LVRVLDANDN APEISFSTVK EAVSEGAAPG 360
  361 TVVALFSVTD RDSEENGQVQ CELLGDVPFR LKSSFKNYYT IVTEAPLDRE AGDSYTLTVV 420
  421 ARDRGEPALS TSKSIQVQVS DVNDNAPRFS QPVYDVYVTE NNVPGAYIYA VSATDRDEGA 480
  481 NAQLAYSILE CQIQGMSVFT YVSINSENGY LYALRSFDYE QLKDFSFQVE ARDAGSPQAL 540
  541 AGNATVNILI VDQNDNAPAI VAPLPGRNGT PAREVLPRSA EPGYLLTRVA AVDADDGENA 600
  601 RLTYSIVRGN EMNLFRMDWR TGELRTARRV PAKRDPQRPY ELVIEVRDHG QPPLSSTATL 660
  661 VVQLVDGAVE PQGGGGSGGG GSGEHQRPSR SGGGETSLDL TLILIIALGS VSFIFLLAMI 720
  721 VLAVRCQKEK KLNIYTCLAS DCCLCCCCCG GGGSTCCGRQ ARARKKKLSK SDIMLVQSSN 780
  781 VPSNPAQVPV EESGGFGSHH HNQNYCYQVC LTPESAKTDL MFLKPCSPSR STDTEHNPCG 840
  841 AIVTGYTDQQ PDIISNGSIL SNETKHQRAE LSYLVDRPRR VNSSAFQEAD IVSSKDSGHG 900
  901 DSEQGDSDHD ATNRAQSAGM DLFSNCTEEC KALGHSDRCW MPSFVPSDGR QAADYRSNLH 960
  961 VPGMDSVPDT EVFETPEAQP GAERSFSTFG KEKALHSTLE RKELDGLLTN TRAPYKPPYL1020
 1021 TRKRIC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle