YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114596859
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVGGRARQT SSVTLAPANR AAAVAKPGDQ PPVSRLSIFK SGGAFLPEPT TPTVYSPNQS  60
   61 APVREASPLG PAALRDFEEK LAPGKNTLQY PRVRGPAFPH SLRASTRSRR SGSRGLTRRA 120
  121 AFGVRAGEGC VCGGPAGSRR RRKLPLTGPG SGSFQCRSRG GRGSVTMGKG DPNKPRGKMS 180
  181 SYAFFVQTCR EEHKKKHPDS SVNFAEFSKK CSERWKTMSA KEKSKFEDMA KSDKARYDRE 240
  241 MKNYVPPKGD KKGKKKDPNA PKRPPSAFFL FCSEHRPKIK SEHPGLSIGD TAKKLGEMWS 300
  301 EQSAKDKQPY EQKAAKLKEK YEKDIAAYRA KGKSEAGKKG PGRPTGSKKK NEPEDEEEEE 360
  361 EEEDEDEEEE DEDEE

Type	Start	End	Confidence
Signal Peptide	1	23	0.60
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	375	0.99