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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114598948, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFLLLYAT QQGQAKAIAE EICEQAVVHG FSADLHCISE SDKYDLKTET APLVVVVSTT  60
   61 GTGDPPDTAR KFVKEIQNQT LPVDFFAHLR YGLLGLGDSE YTYFCNGGKI IDKRLQELGA 120
  121 RHFYDTGHAD DCVGLELVVE PWIAGLWPAL RKHFRSSRGQ EEISGALPVA SPASLRTDLV 180
  181 KSELLHIESQ VELLRFDDSG GKDSEVLKQN AVNSNQSNVL IEDFESSLTR SEPPLSQASL 240
  241 NIPALPPEYL QVYLQESLGQ EESQASVTSA DPIFQVPISK AVQLTTNDAI KTTLLVELDI 300
  301 SNTDFSYQPG DAFSVICPNS DSEVQSLLQR LQLEDKREHC VLLKIKADTK KKGAALPQHI 360
  361 PAGCSLQFIF TWCLEIRAIP KKAFLRALVD YTSDSAEKRR LQELCSKQGA ADYSRFVRDA 420
  421 CACLLDLLLA FPSCQPPLSL LLEHLPKLQP RPYSCASSSL FHPGKLHFVF NIVEFLSTAT 480
  481 TEVLRKGVCT GWLALLVASV LQPNIHSSHE DSGKALAPKI SISPRTTNSF HLPDDPSIPI 540
  541 IMVGPGTGIA PFIGFLQHRE KLQEQHPDGN FGAMWLFFGC RHKDRDYLFR KELRHFLKHG 600
  601 ILTHLKVSFS RDAPVGEEEA PAKYVQDNIQ LHGQQVARIL LQENGHIYVC GDAKNMAKDV 660
  661 HDALVEIISK EVGVEKLEAM KTLATLKEEK RYLQDIWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle