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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114602280
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRELCFSR QRQVLFLFLF WGVSLAGSGF GRYSVTEETE KGSFVVNLAK DLGLAEGKLA  60
   61 ARGTRVVSDD NKQYLLLDSH TGNLLTNEKL DREKLCGPKE PCMLYFQILM DDPFQIYRAE 120
  121 LRVRDINDHA PVFQDKETVL KISENTAEGT AFRLERAQDP DGGLNGIQNY TISPNSFFHI 180
  181 KISGSDEGMI YPELVLDKAL DREEQEELSL TLTALDGGSP SRSGTSTVRI VVLDVNDNAP 240
  241 QFAQALYETQ APENSPIGFL IVKVSAEDVD SGVNAEVSYS FFDASENIRT TFQINPFSGE 300
  301 IFLRELLDYE LVNSYKINIQ AMDGGGLSAR CRVLVEVLDT NDNPPELIVS SFSNSVAENS 360
  361 PETPLAVFKI NDRDSGENGK MVCYIQENLP FLLKPSVENF YILITEGALD RELRAEYNIT 420
  421 ITVTDLGTPR LKTEHNITVL VSDVNDNAPA FTQTSYTLFV RENNSPALHI GSVSATDGDS 480
  481 GTNAQVTYSL LPPQDLHLPL ASLVSINADN GHLFALRSLD YEALQAFEFR VGATDRGSPA 540
  541 LSSEALVRVL VLDANDNSPF VLYPLQNGSA PCTELVPRAA EPGYLVTKVV AVDGDSGQNA 600
  601 WLSYQLLKAT EPGLFGVWAH NGEVRTARLL SERDAAKHRL VVLVKDNGEP PRSATATLHL 660
  661 LLVDGFSQPY LPLPEAAPAQ AQADLLTVYL VVALASVSSL FLFSVLLFVA VRLCRRSRAA 720
  721 SVGRCSVPEG PFPGHLVDVS GAETLSQSYQ YEVCLAGGSG TNEFKFLKPI IPNFPPQCPG 780
  781 KEIQGNSTFP NNFGFNIQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle