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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114602093
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVTTLIMP RIFLQQTPSL LQLPAQGNSI GSCVGALHWC QESVYINRCV VEGASGDRVM  60
   61 VLGALLWPQW EAVWPSEMSQ RQRKAQLLES LKPLGVERSR ILECQEEAAQ VLLGSHSRDH 120
  121 LVSALPWPQQ PTHLSAAQEV EESERNYIVG KSDRKLRSSS PEAEAGVKIS FRPSLPQAEG 180
  181 HGGSSCKSLQ RAGLGAGLPP RCGAGGAARW SGGPRLGEAA SGVTAASSPA QTVAAAFAQG 240
  241 ELVAAAAAWN CGSCVCHSAA GGRRSLTTAP QSLPSSRMAP LGMLLGLLMA ACFTFRLSHQ 300
  301 NLKEFALTNP EKSSTKETER KETKAEEELD AEVLEVFHPT HEWQALRPGQ AVPAGSHVRL 360
  361 NLQTGEREAK LQYEDKFRNN LKGKRLDINT NTYTSQDLKS ALAKFKEGAE MESSKEDKAR 420
  421 QAEVKRLFRP IEELKKDFDE LNVVIETDMQ IMVRLINKFN SSSSSLEEKI AALFDLEYYV 480
  481 HQMDNAQDLL SFGGLQVVIN GLNSTEPLVK EYAAFVLGAA FSSNPKVQVE AIEGGALQKL 540
  541 LVILATEQPL TAKKKVLFAL CSLLRHFPYA QRQFLKLGGL QVLRSLVQEK GTEVLAVRVV 600
  601 TLLYDLVTEK MFAEEEAELT QEMSPEKLQQ YRQVHLLPGL WEQGWCEITA HLLALPEHDA 660
  661 REKVLQTLGV LLTTCRDRYR QDPQLGRTLA SLQAEYQALA SLELQDGEDE GYFQELLGSV 720
  721 NSLLKELR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle