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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114602683
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFHKYLHTQ VESTSPKPTV IPRWKHVVYN QPAHLHPEPP RSLPCRKAGS PESRTPKPPT  60
   61 PSCCPAPAAS PPAPVGSWGP DPRRTCRTYP LPEARERGAL ADSSGHPQPL SRASAAAAAA 120
  121 PPRWGAGERE ARARGCGRRT PAPDHLGSPR IVLLPNRAGL HGLNSPQPRW SPLPCPLPPP 180
  181 LGARDSGGGH SRFLPNVGQC RCAALCLETS SRAGAQGRQV AATEEPKAPG LAERTARRLL 240
  241 QSTGWNWQAP RAPSTRQAEC AGRVPTTPTP QPLNEASRRP LAARRAPPWV RPLRRPQPVR 300
  301 SPARLRAMGQ PGNGSAFLLA PNGSHAPDHD VTQERDEVWV VGMGIFMSLI VLAIVFGNVL 360
  361 VITAIAKFER LQTVTNYFIT SLACADLVMG LAVVPFGAAH ILMKMWTFGN FWCEFWTSID 420
  421 VLCVTASIET LCVIAVDRYF AITSPFKYQS LLTKNKARVI ILMVWIVSGL TSFLPIQMHW 480
  481 YRATHQEAIN CYANETCCDF FTNQAYAIAS SIVSFYVPLV IMVFVYSRVF QEAKRQLQKI 540
  541 DKSEGRFHVQ NLSQVEQDGR TGHGLRRSSK FCLKEHKALK TLGIIMGTFT LCWLPFFIVN 600
  601 IVHVIQDNLI RKEVYILLNW IGYVNSGFNP LIYCRSPDFR IAFQELLCLR RSSLKAYGNG 660
  661 YSSNGNTGEQ SGYHVEQEKE NKLLCEDLPG TEDFVGHEGT VPSDNIDSQG RNCSTNDSLL 720
  721 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle