YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114587110
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREGSVEPPV WPRGSWTNGE GHVGGRRGAP RQWGATARGR DLEAVRRGGC GSVGRRRQRR  60
   61 RRRRMRRMWA TQGLAVALAL SVLPGSRSLR PGDCEVCISY LGRFYQDLKD RDVTFSPATV 120
  121 ENELIKFCRE ARGKENRLCY YIGATDDAAT KIINEVSKPL AHHIPVEKIC EKLKKKDSQI 180
  181 CELKYDKQID LSTVDLKKLR VKELKKILDD WGETCKGCAE KSDYIRKINE LMPKYAPKAA 240
  241 SARTDL

Type	Start	End	Confidence
Cytoplasmic	1	64	0.99
Transmembrane Helix	65	85	0.89
Non-Cytoplasmic	86	246	0.99