YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114593056
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLDVNQLQ FPPPDKVVVK TKTEYEPDRK KGKARPPQIA EFTVSITEGV TERFKVSVLV  60
   61 LFALAFLTCV VFLVVYKVYK YDRACPDGFV LKNTQCIPEG LESYYAEQDS SAREKFYTVI 120
  121 NHYNLAKQSI TRSVSPWMSV LSEEKLSEQE TEAAEKSA

Type	Start	End	Confidence
Cytoplasmic	1	55	0.44
Transmembrane Helix	56	79	0.77
Non-Cytoplasmic	80	158	0.54