YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114591394
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNPTRPRGG ASSFSYRHLG SCGGLLGTGL TGLLKGTMSG RLWSKAIFAG YKRGLRNQRE  60
   61 HTALLKIEGV YARDETEFYL GKRCAYVYKA KNNTVTPGGK PNKTRVIWGK VTRAHGNSGM 120
  121 VRAKFRSNLP AKAIGHRIRV MLYPSRI

Type	Start	End	Confidence
Cytoplasmic	1	13	0.33
Transmembrane Helix	14	34	0.70
Non-Cytoplasmic	35	147	0.53