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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114588810
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWYRHDPRS CSPSRSLATA FGPSNLGSPN AACPAPFPWR RAAKQRERAL LSGFEPPTPQ  60
   61 VSRKRLPPGP VGPPRPGPVP AQGGAGPARS SPRPASPRPT LPRAPAPLYP CLLGLCALLP 120
  121 RLPGLNICTS GSATSCEECL LIHPKCAWCS KEDFGSPRSI TSRCDLRANL VRNGCGGEIE 180
  181 SPASSFHVLR SLPLSSKGSG SAGWDVIQMT PQEIAVNLRP GDKTTFQLQV RQVEDYPVDL 240
  241 YYLMDLSLSM KDDLDNIRSL GTKLAEEMRK LTSNFRLGFG SFVDKDISPF SYTAPRYQTN 300
  301 PCIGYKLFPN CVPSFGFRHL LPLTDRVDSF NEEVRKQRVS RNRDAPEGGF DAVLQAAVCK 360
  361 EKIGWRKDAL HLLVFTTDDV PHIALDGKLG GLVQPHDGQC HLNEANEYTA SNQMDYPSLA 420
  421 LLGEKLAENN INLIFAVTKN HYMLYKNFTA LIPGTTVEIL DGDSKNIIQL IINAYNSIRS 480
  481 KVELSVWDQP EDLNLFFTAT CQDGVSYPGQ RKCEGLKIGD TASFEVSVEA RSCPSRHTEH 540
  541 VFALRPVGFR DSLEVGVTYN CTCGCSVGLE PNSARCSGSG TYVCGLCECS PGYLGTRCEC 600
  601 QDGENQSVYQ NLCREAEGKP LCSGRGDCSC NQCSCFESEF GKIYGPFCEC DNFSCARNKG 660
  661 VLCSGHGECH CGECKCHAGY IGDNCNCSTD ISTCRGRDGQ ICSERGHCLC GQCQCTEPGA 720
  721 FGEMCEKCPT CPDACSTKRD CVECLLLHSG KPDNQTCHSL CRDEVITWVD TIVKDDQEAV 780
  781 LCFYKTAKDC VMMFTYVELP SGKSNLTVLR EPECGNTPNA MTILLAVVGS ILLVGLALLA 840
  841 IWKLLVTIHD RREFAKFQSE RSRARYEMAS NPLYRKPIST HTVDFTFNKF NKSYNGTVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle