YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114593321
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVGWQMLS LSLGLVLAIL NKVAPQACPA QCSCSGSTVD CHGLALRSVP RNIPRNTERL  60
   61 DLNGNNITRI TKTDFAGLRH LRVLQLMENK ISTIERGAFQ DLKELERLRL NRNHLQLFPE 120
  121 LLFLGTAKLY RLDLSENQIQ AIPRKAFRGA VDIKNLQLDY NQISCIEDGA FRALRDLEVL 180
  181 TLNNNNITRL SVASFNHMPK LRTFRLHSNN LYCDCHLAWL SDWLRQRPRV GLYTQCMGPS 240
  241 HLRGHNVAEV QKREFVCSGK GEGRSFMAPS CSVLHCPAAC TCSNNIVDCR GKGLTEIPTN 300
  301 LPETITEIRL EQNTIKVIPP GAFSPYKKLR RIDLSNNQIS ELAPDAFQGL RSLNSLVLYG 360
  361 NKITELPKSL FEGLFSLQLL LLNANKINCL RVDAFQDLHN LNLLSLYDNK LQTIAKGTFS 420
  421 PLRAIQTMHL AQNPFICDCH LKWLADYLHT NPIETSGARC TSPRRLANKR IGQIKSKKFR 480
  481 CSAKEQYFIP GTEDYRSKLS GDCFADLACP EKCHCEGTTV DCSNQKLNKI PEHIPQYTAE 540
  541 LRLNNNEFTV LEATGIFKKL PQLRKINFSN NKITDIEEGA FEGASGVNEI LLTSNRLENV 600
  601 QHKMFKGLES LKTLMLRSNR ITCVGNDSFI GLSSVRLLSL YDNQITTVAP GAFDTLHSLS 660
  661 TLNLLANPFN CNCYLAWLGE WLRKKRIVTG NPRCQKPYFL KEIPIQDVAI QDFTCDDGND 720
  721 DNSCSPLSRC PTECTCLDTV VRCSNKGLKV LPKGIPRDVT ELYLDGNQFT LVPKELSNYK 780
  781 HLTLIDLSNN RISTLSNQSF SNMTQLLTLI LSYNRLRCIP PRTFDGLKSL RLLSLHGNDI 840
  841 SVVPEGAFND LSALSHLAIG ANPLYCDCNM QWLSDWVKSE YKEPGIARCA GPGEMADKLL 900
  901 LTTPSKKFTC QGPVDVSILA KCNPCLSNPC KNDGTCNSDP VDFYRCTCPY GFKGQDCDVP 960
  961 IHACISNPCK HGGTCHLKEG EEDGFWCICA DGFEGENCEV NIDDCEDNDC ENNSTCVDGI1020
 1021 NNYTCLCPPE YTGELCEEKL DFCAQDLNPC QHDSKCILTP KGFKCDCTPG YVGEHCDIDF1080
 1081 DDCQDNKCKN GAHCTDAVNG YTCICPEGYS GLFCEFSPPM VLPRTSPCDN FDCQNGAQCI1140
 1141 VRINEPICQC LPGYQGEKCE KLVSVNFINK ESYLQIPSAK VWPQTNITLQ IATDEDSGIL1200
 1201 LYKGDKDHIA VELYRGRVRA SYDTGSHPAS AIYSVETIND GNFHIVELLA LDQSLSLSVD1260
 1261 GGNPKIITNL SKQSTLNFDS PLYVGGMPGK SNVASLRQAP GQNGTSFHGC IRNLYINSEL1320
 1321 QDFQKVPMQT GILPGCEPCH KKVCAHGTCQ PSSQAGFTCE CQEGWMGPLC DQRTNDPCLG1380
 1381 NKCVHGTCLP INAFSYSCKC LEGHGGVLCD EEEDLFNPCQ AIKCKHGKCR LSGLGQPYCE1440
 1441 CSSGYTGDSC DRETERGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle