YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114589488, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRIPVVLL ACGSFNPITN MHLRMFEVAR DHLHQTGMYQ VIQGIISPVN DTYGKKDLAA  60
   61 SHHRVAMARL ALQTSDWIRV DPWESEQAQW METVKVLRHH HSELLRSPPQ MEGPDHGKAL 120
  121 FSTPAAVPEL KLLCGADVLK TFQTPNLWKD AHIQEIVEKF GLVCVGRVGH DPKGYIAESP 180
  181 ILRMHQHNIH LAKEPVQNEI SATYVRRALG QGQSVKYLIP DAVITYIKDH GLYTKGSTWK 240
  241 GKSTQSTEGK TC

Type	Start	End	Confidence
Signal Peptide	1	21	0.71
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	252	0.99