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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114593704
Protein type: Transmembrane
Type Confidence: 0.52
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIPSPCPQR CVGQFFRECS GDCKEWPDSG PVMTFPTRVK TGVARSGPAG AGDEAARTGL  60
   61 GAREGPSIPL SSPAPAPASP APPAWPPRPA VTHGRLRSPT RRAYTSLVLV GCTNLCAVLF 120
  121 ARCLDDHLVS LRMSGSRKEF DVKQILKIRW RWFGHQASSP NSTVDSQQGE FWNRGQTGTN 180
  181 GGRKFLDPCS LHLPLASIGY RRSSQLDFQN SPSWPMASTS EVPAFEFTAE DCGGAHWLDR 240
  241 PEVDDGTSEE ENESDSSSCR TSNSSQTLSS CHTMEPCTSD EFFQALNHAE QTFKKMENYL 300
  301 RHKQLCDVIL VAGDRRIPAH RLVLSSVSDY FAAMFTNDVR EARQEEIKME GVEPNSLWSL 360
  361 IQYAYTGRLE LKEDNIECLL STACLLQLSQ VVEACCKFLM KQLHPSNCLG IRSFADAQGC 420
  421 TDLHKVAHNY TMEHFMEVIR NQEFVLLPAS EIAKLLASDD MNIPNEETIL NALLTWVRHD 480
  481 LEQRRKDLSK LLAYIRLPLL APQFLADMEN NALFRDDIEC QKLIMEAMKY HLLPERRPML 540
  541 QSPRTKPRKS TVGTLFAVGG MDSTKGATSI EKYDLRTNMW TPVANMNGRR LQFGVAVLDD 600
  601 KLYVVGGRDG LKTLNTVECY NPKTKTWSVM PPMSTHRHGL GVAVLEGPMY AVGGHDGWSY 660
  661 LNTVERWDPQ ARQWNFVATM STPRSTVGVA VLSGKLYAVG GRDGSSCLKS VECFDPHTNK 720
  721 WTLCAQMSKR RGGVGVTTWN GLLYAIGGHD APASNLTSRL SDCVERYDPK TDMWTAVASM 780
  781 SISRDAVGVC LLGDKLYAVG GYDGQAYLNT VEAYDPQTNE WTQVAPLCLG RAGTCVVTVK 840
  841 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle