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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114586868
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALDSLSLF TSLGLSEQKA RETLKNSALS AQLREAATQA QQTLGSTIDK ATGILLYGLA  60
   61 SRLRDTRRLS FLVSYIASKK IHTEPQLSGW WCQGLTFQEA RLSLEFHEIR TLSVHFLEQR 120
  121 CHKLTGSFFS AALEYVRSHP LDPIDTVDFE RECGVGVIVT PEQIEEAVEA AINRHRPQLL 180
  181 VERYHFNMGL LMGEARAVLK WADGKMIKNE VDMQVLHLLG PKMEADLEKK FKVAKARLEE 240
  241 TDRRTAKDVM ENGETADQTL SLIEQLRGEA LKFHKPGENY KTPGYVVTPH TMNLLKQHLE 300
  301 ITGGQVRTRF PPEPNGILHI GHAKAINFNF GYAKANNGIC FLRFDDTNPE KEEAKFFTAI 360
  361 CDMVAWLGYT PYKVTYASDY FDQLYAWAVE LIRRGLAYVC HQRGEELKGH NTLPSPWRDR 420
  421 PMEESLLLFE AMRKGKFSEG EATLRMKLVM EDGKMDPVAY RVKYTPHHRT GDKWCIYPTY 480
  481 DYTHCLCDSI EHITHSLCTK EFQARRSSYF WLCNALDVYC PVQWEYGRLN LHYAVVSKRK 540
  541 ILQLVATGAV RDWDDPRLFT LTALRRRGFP PEAINNFCAR VGVTVAQTTM EPHLLEACVR 600
  601 DVLNDTAPRA MAVLESLRVI ITNFPAAKSL DIQVPNFPAD ETKGFHQVPF APIVFIERTD 660
  661 FKEEPEPGFK RLAWGQPVGL RHTGYVIELQ HVVKGPSGCV ESLEVTCRRA DAGEKPKAFI 720
  721 HWVSQPLMCE VRLYERLFQH KNPEDPTEVP GGFLSDLNLA SLHVVDAALV DCSVALAKPF 780
  781 DKFQFERLGY FSVDPDSHQG KLVFNRTVTL KEDPGKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle