YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114591162
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGPNLCFP ADLLMSQADS RLAWKNTIIS MGEDFRRCCQ QARMMLDWRL ASAHFILAVT  60
   61 LTLWSSGKVL SVDVTTTEAF DSGVIDVQST PTVREEKSAT DLTAKLLLLD ELVSLENDVI 120
  121 ETKKKRSFSG FGSPLDRLSA GSVDHKGKQR KVVDHPKRRF GIPVDRIGRN RLSNSRG

Type	Start	End	Confidence
Cytoplasmic	1	45	0.56
Transmembrane Helix	46	64	0.53
Non-Cytoplasmic	65	177	0.96