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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114590909
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAPATAENR FLMYLAVIGE TSKKEYLYYQ PKRDAKLANL TFISTITTNL TEVSNEASQV  60
   61 PDLPICHPSI CRRFCAATRC IYDQGRMIPG KNYIAWDDQQ ALRIKEGGDW SSLTCGLWAL 120
  121 SHGPAPDWLR RRENPADSPS DLVSDWAGTV PQLLLLLGSE IGSGARLRVR RLRMELSGRA 180
  181 GGGDVRSGGG RGPLVALGTL YLWALESRHK SATELWRWWL RRRRRQRRRQ LWGLRLGVCR 240
  241 PPLLLGPGMY RWLVRILGTI FRFCDRSVPP ARALLKRRRS DSTLFSTVDT DEIPAKRPRL 300
  301 DCFIHQVKNS LYNAASLFGF PFQMTTKPMV FSNSSSCELT GSGSWNNMLK LGNKSPNGIS 360
  361 DYPKIRVTVT RDQPRRVLPS FGFTLNSEGY NRRPGGRRHS KGNPESSLMW KPQEQAVTEM 420
  421 ISEESGKGLR RPHCTVEEGV QKEEREKYRK LLERLKESGH GNSVCPVTSN YHSSQRSQMD 480
  481 TLKTKGWGEE QNHGVKTTQF VPKQYRLVET RGPLCSLRSE KRCSKGKITD TEKMVGIRFE 540
  541 NESRRGYQLE PDLSEEVSAR LRLGSGSNGL LRRKVSIIET KEKTCSGKER DRRTDDLLEL 600
  601 TEDMEKEISN ALGHGPQDEI LSSAFKLRIT RGDIQTLKNY HWLNDEVINF YMNLLVERNK 660
  661 KQGYPALHVF STFFYPKLKS GGYQAVKRWT KGVNLFEQEI ILVPIHRKVH WSLVVIDLRK 720
  721 KCLKYLDSMG QKGHRICEIL LQYLQDESKT KRNIDLNLLE WTHHSMKPHE IPQQLNGSDC 780
  781 GMFTCKYADY ISRDKPITFT QHQMPLFRKK MVWEILHQQL L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle