YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114589479
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVPTGAFDG VREDKQEQVF EEGRVGLALG SLTALAFHGC SAGLLAALPD SSPSATCSVG  60
   61 KTSLITRFMY DSFDNTYQAT IGIDFLSKTM YLEDRTVRLQ LWDTAGQERF RSLIPSYIRD 120
  121 STVAVVVYDI TNLNSFQQTS KWIDDVRTER GSDVIIMLVG NKTDLADKRQ ITIEEGEQRA 180
  181 KELSVMFIET SAKTGYNVKQ LFRRVASALP GMENVQEKSK EGMIDIKLDK PQEPPASEGG 240
  241 CSC

Type	Start	End	Confidence
Cytoplasmic	1	24	0.54
Transmembrane Helix	25	46	0.54
Non-Cytoplasmic	47	243	0.96