YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114581903
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLSSRQPQ SYFTEEENDQ QVNFYYREAA TDKRPNLTRC QREEKGPLPC SQLISKVNLF  60
   61 SPLCRGELSS LVHPKPRLLH PGAAARIRAG PRLRIESHSF DLCRSPCRRR RLPGREEAGE 120
  121 EPTSPVTQYL QPRSPEECKM FACAKLACTP SLIRAGSRVA YRPISASVLS RPEASRTGEG 180
  181 STVFNGAQNG VSQLIQREFQ TSAISRDIDT AAKFIGAGAA TVGVAGSGAG IGTVFGSLII 240
  241 GYARNPSLKQ QLFSYAILGF ALSEAMGLFC LMVAFLILFA M

Type	Start	End	Confidence
Cytoplasmic	1	213	0.79
Transmembrane Helix	214	240	0.83
Non-Cytoplasmic	241	255	0.69
Transmembrane Helix	256	279	0.93
Cytoplasmic	280	281	0.68