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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114580782
Protein type: Globular with Signal Peptide
Type Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCKGDASGA CAAGALPVTG VCYKMGVLVV LTVLWLFSSV KADSKAITTS LTTKWFSTPL  60
   61 LLEASEFLAE DSQEKFWNFV EASQNIGSSD HDGTDYSYYH AVLEAAFQFL SPLQQNLLKF 120
  121 CLSLRSYSAT IQAFQQIAAD EPPPEGCNSF FSVHGKKTCE SDTLEALLLT ASERPKPLLF 180
  181 KGDHRYPSSN PESPVVIFYS EIGSEEFSNF HRQLISKSNA GKINYVFRHY IFNPRKEPVY 240
  241 LSGYGVELAI KSTEYKAKDD TQVKGTEVNT TVIGENDPID EVQGFLFGKL RDLHPDLEGQ 300
  301 LKELRKHLVE STNEMAPLKV WQLQDLSFQT AARILASPVE LALVVMKDLS QNFPTKARAI 360
  361 TKTAVSSELR TEVEENQKYF KGTLGLQPGD SALFINGLHM DLDTQDIFSL FDVLRNEARV 420
  421 MEGLHRLGIE GLSLHNVLKL NIQPSEADYA VDIRSPAISW VNNLEVDSRY NSWPSSLQEL 480
  481 LRPTFPGVIR QIRKNLHNMV FIVDPAHETT AELINTAEMF LSNHIPLRIG FIFVVNDSED 540
  541 VDGMQDAGVA VLRAYNYVAQ EVDDYHAFQT LTHIYNKVRT GEKVKVEHVV SVLEKKYPYV 600
  601 EVNSILGIDS AYDRNRKEAR GYYEQTGVGP LPVVLFNGMP FEREQLDPDE LETITMHKIL 660
  661 ETTTFFQRAV YLGELPHDQD VVEYIMNQPN VVPRINSRIL TAERDYLDLT ASNNFFVDDY 720
  721 ARFTILDSQG KTAAVANSMN YLTKKGMSSK EIYDDSFIRP VTFWIVGDFD SPSGRQLLYD 780
  781 AIKHQKSSNN VRISMINNPA KEISYENTQI SRAIWAALQT QTSNAAKNFI TKMAKEGAAE 840
  841 ALAAGADIAE FSVGGMDFSL FKEVFESSKM DFILSHAVYC RDVLKLKKGQ RAVISNGRII 900
  901 GPLEDSELFN QDDFHLLENI ILKTSGQKIK SHIQQLRVEE DVASDLVMKV DALLSAQPKG 960
  961 DARIEYQFFE DRHSAIKLRP KEGETYFDVV AVVDPVTREA QRLAPLLLVL AQLINMNLRV1020
 1021 FMNCQSKLSD MPLKSFYRYV LEPEISFTSD NSFAKGPIAK FLDMPQSPLF TLNLNTPESW1080
 1081 MVESVRTPYD LDNIYLEEVD SVVAAEYELE YLLLEGHCYD ITTGQPPRGL QFTLGTSANP1140
 1141 VIVDTIVMAN LGYFQLKANP GAWILRLRKG RSEDIYRIYS HDGTDSPPDA DEVVIVLNNF1200
 1201 KSKIIKVKVQ KKADMVNEDL LSDGTSENES GFWDSFRWGF TGGQKTEEVK QDKDDIINIF1260
 1261 SVASGHLYER FLRIMMLSVL KNTKTPVKFW FLKNYLSPTF KEFIPYMANE YNFQYELVQY1320
 1321 KWPRWLHQQT EKQRIIWGYK ILFLDVLFPL VVDKFLFVDA DQIVRTDLKE LRDFNLDGAP1380
 1381 YGYTPFCDSR REMDGYRFWK SGYWASHLAG RKYHISALYV VDLKKFRKIA AGDRLRGQYQ1440
 1441 GLSQDPNSLS NLDQDLPNNM IHQVPIKSLP QEWLWCETWC DDASKKRAKT IDLCNNPMTK1500
 1501 EPKLEAAVRI VPEWQDYDQE IKQLQIRFQK EKETGALYKE KTKEPSREGP QKREEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle