YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114582125
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYTMKKVHA LWASVCLLLN LAPAPLNADS EEDEEHTIIT DTELPPLKLM HSFCAFKADD  60
   61 GPCKAIMKRF FFNIFTRQCE EFIYGGCEGN QNRFESLEEC KKMCTRDNAN RIIKTTLQQE 120
  121 KPDFCFLEED PGICRGYITR YFYNNQTKQC ERFKYGGCLG NMNNFETMEE CKNICEDGPN 180
  181 GFQVDNYGTQ INAVNNSLTP QSTKVPSLFA DRGLCRANVN RFYYNSVIGK CRPFKYSGCG 240
  241 GNENNFTSKQ ECLRACKKGF IQRISKGGLI KTKRKRKKQR VKIAYEEIFV KNM

Type	Start	End	Confidence
Signal Peptide	1	28	0.99
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	293	0.99