YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114583567
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIGQKTAKL RAAVLCFLFS SSDFSLASLF HLPTVSTPLG QGRVNQLGGV FINGRPLPNH  60
   61 IRHKIVEMAH HGIRPCVISR QLRVSHGCVS KILCRYQETG SIRPGAIGGS KPKVTTPDVE 120
  121 KKIEEYKREN PGMFSWEIRD KLLKDAVCDR NTVPSVSSIS RILRSKFGKG EEEEADLERK 180
  181 EAEESEKKAK HSIDGILSER ASAPQSDEGS DIDSEPDLPL KRKQRRSRTT FTAEQLEELE 240
  241 RAFERTHYPD IYTREELAQR AKLTEARVQV WFSNRRARWR KQAGANQLMA FNHLIPGGFP 300
  301 PTAMPTLPTY QLSETSYQPT SIPQAVSDPS STVHRPQPLP PSTVHQSTIP SNPDSSSAYC 360
  361 LPSTRHGFSS YTDSFVPPSG PSNPMNPTIG NGLSPQVPFI ISSQISHK

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	408	0.99