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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114580629
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAMKQEPQP TPGARASQAQ PADQVRVVPG SPASPWTLRE VRASECAPGP GERMRKVESR  60
   61 GEGGREELGS NSPPQRNWKG IAIALLVILV VCSLITMSVI LLTPDELTNS SETRLSLEDL 120
  121 FRKDFVLHDP EARWINDTDV VYKSENGHVI KLNIETNATT LLLENTTFVT FKASRHSVSP 180
  181 DLKYVLLAYD VKQIFHYSYT ASYVIYNIHT REVWELNPPE VEDSVLQYAA WGVQGQQLIY 240
  241 IFENNIYYQP DIKSSSLRLT SSGKEEIIFN GIADWLYEEE LLHSHIAHWW SPDGERLAFL 300
  301 MINDSLVPTM VIPRFTGALY PKGKQYPYPK AGQVNPTIKL YVVNLYGPTH TLELMPPDSF 360
  361 KSREYYITMV KWVSNTKTVV RWLNRPQNIS ILTVCETTTG ACSKKYEMTS DTWLSKQNEE 420
  421 PVFSRDGSKF FMTVPVKQGG RGEFHHIAMF LIQSKSEQIT VRHLTSGNWE VIKILAYDET 480
  481 TQKIYFLSTE SSPRGRQLYS ASTEGLLNRQ CISCNFMKEQ CTYFDASFSP MNQYFLLFCE 540
  541 GPRVPVVSLH STDNPAKYFT LESNSMLKEA ILKKKIGKPE IKILHIDDYE LPLQLSLPKD 600
  601 FMDRNQYALL LIMDEEPGGQ LVTDKFHIDW DSVLIDMDNV IVARFDGRGS GFQGLKILQE 660
  661 IHRRLGSVEV KDQITAVKFL LKLPYIDSKR LSIFGKGYGG YIASMILKSD EKLFKCGSVV 720
  721 APITDLKLYA SAFSERYLGM PSKEESTYQA ASVLHNVHGL KEENILIIHG TADTKVHFQH 780
  781 SAELIKHLIK AGVNYTMQVY PDEGHNVSEK SKYHLYSTIL KFFSDCLKEE ISVLPQEPEE 840
  841 DE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle