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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114584077
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKHRHLPLV AVFCLFLSGF PTTHAQQQQA DVKNGAAADI IFLVDSSWTI GEEHFQLVRE  60
   61 FLYDVVKSLA VGENDFHFAL VQFNGNPHTE FLLNTYRTKQ EVLSHISNMS YIGGTNQTGK 120
  121 GLEYIMQSHL TKAAGSRAGD GVPQVIVVLT DGHSKDGLAL PSAELKSADV NVFAIGVEDA 180
  181 DEGALKEIAS EPLNMHMFNL ENFTSLHDIV GNLVSCVHSS VSPERAGDTE TLKDITAQDS 240
  241 ADIIFLIDGS NNTGSVNFAV ILDFLVNLLE KLPIGTQQIR VGVVQFSDEP RTMFSLDTYS 300
  301 TKAQVLGAVK ALGFAGGELA NIGLALDFVV ENHFTRAGGS RVEEGVPQVL VLISAGPSSD 360
  361 EIRYGVVALK QASVFSFGLG AQAASRAELQ HIATDDNLVF TVPEFRSFGD LQEKLLPYIV 420
  421 GVAQRHIVLK PPTIVTQVVE VNKRDIVFLV DGSSALGLAN FNAIRDFIAK VIQRLEIGQD 480
  481 LIQVAVAQYA DTVRPEFYFN THPTKREVIT AVRKMKPLDG SALYTGSALD FVRNNLFTSS 540
  541 AGYRAAEGIP KLLVLITGGK SLDEISQPAQ ELKRSSIMAF AIGNKGADQA ELEEIAFDSS 600
  601 LVFIPAEFRA APLQGMLPGL LAPLRTLSGT PEVHSNKRDI IFLLDGSANV GKTNFPYVRD 660
  661 FVMNLVNSLD IGNDNIRVGL VQFSDTPVTE FSLNTYQTKS DILGHLRQLQ LQGGSGLNTG 720
  721 SALSYVYANH FMEAGGSRIR EHVPQLLLLL TAGQSEDSYL QAANALTRAG ILTFCVGASQ 780
  781 ANKAELEQIA FNPSLVYLMD DFSSLPALPQ QLIQPLTTYV SGGVEEVPLA QPESKRDILF 840
  841 LFDGSANLVG QFPVVRDFLY KIIDELNVKP EGTRIAVAQY SDDVKVESRF DEHQSKPEIL 900
  901 NLVKRMKIKT GKALNLGYAL DYAQRYIFVK SAGSRIEDGV LQFLVLLVAG RSSDRVDGPA 960
  961 SNLKQSGVVP FIFQAKNADP AELEQIVLSP AFILAAESLP KIGDLQPQIV NLLKSVHNGA1020
 1021 PAPVSGEKDV VFLLDGSEGV RSGFPLLKEF VQRVVESLDV GQDRVRVAVV QYSDRTRPEF1080
 1081 YLNSYMNQQD VVNAVRQLTL LGGPTPNTGA ALEFVLRNIL VSSAGSRITE GVPQLLIVLT1140
 1141 ADRSGDDVRN PSVVVKRGGA VPIGIGIGNA DITEMQTISF IPDFAVAIPT FRQLGTVQQV1200
 1201 ISERVTQLTR EELSRLQPVL QPLPSPGVGG KRDVVFLIDG SQSAGPEFQY IRTLIERLVD1260
 1261 YLDVGFDTTR VAVIQFSDDP KVEFLLNAHS SKDEVQNAVQ RLRPKGGRQI NVGSALEYVS1320
 1321 RNIFKRPLGS RIEEGVPQFL VLISSGKSDD EVDDPAVELK QFGVAPFTIA RNADQEELVK1380
 1381 ISLSPEYVFS VSTFRELPSL EQKLLTPITT LTSEQIQKLL ASTRYPPPVR EFRELPNIEE1440
 1441 RIMNSFGPSA ATPAPPGVDT PPPSRPEKKK ADIVFLLDGS INFRRDSFQE VLRFVSEIVD1500
 1501 TVYEDGDSIQ VGLVQYNSDP TDEFFLKDFS TKRQIIDAIN KVVYKGGRHA NTKVGLEHLR1560
 1561 VNHFVPEAGS RLDQRVPQIA FVITGGKSVE DAQDVSLALT QRGVKVFAVG VRNIDSEEVG1620
 1621 KIASNSATAF RVGNVQELSE LSEQVLETLH DAMHETLCPG VTDAAKACNL DVILGFDGSR1680
 1681 DQNVFVAQKG FESKVDAILN RISQMHRVSC SGGRSPTVRV SVVANTPSGP VEAFDFDEYQ1740
 1741 PEMLEKFRNM RSQHPYVLTE DTLKVYLNKF RQSSPDSVKV VIHFTDGADG DLADLHRASE1800
 1801 NLRQEGVRAL ILVGLERVAN LERLMHLEFG RGFMYDRPLR LNLLDLDYEL AEQLDNIAEK1860
 1861 ACCGVPCKCS GQRGDRGPIG SIGPKGTPGE DGYRGYPGDE GGPGERGPPG VNGTQGFQGC1920
 1921 PGQRGVKGSR GFPGEKGEVG EIGLDGLDGE DGDKGLPGSS GEKGNPGRRG DKGPRGEKGE1980
 1981 RGDVGIRGDP GNPGQDSQER GPKGETGDLG PMGVPGRDGV PGGPGETGKN GGFGRRGPPG2040
 2041 AKGNKGGPGQ PGFEGEQGTR GAQGPAGPAG PPGLIGEQGI SGPRGSGGAA GAPGERGRTG2100
 2101 PLGRKGEPGE PGPKGGIGNR GPRGETGDDG RDGVGSEGRR GKKGERGFPG YPGPKGNPGE2160
 2161 PGLNGTTGPK GIRGRRGNSG PPGIVGQKGD PGYPGPAGPK GNRGDSIDQC ALIQSIKDKC2220
 2221 PCCYGPLECP VFPTELAFAL DTSEGVNQDT FGRMRDVVLS IVNDLTIAES NCPRGARVAV2280
 2281 VTYNNEVTTE IRFADSKRKS VLLDKIKNLQ VALTSKQQSL ETAMSFVARN TFKRVRNGFL2340
 2341 MRKVAVFFSN TPTRASPQLR EAVLKLSDAG ITPLFLTRQE DRQLINALQI NNTAVGHALV2400
 2401 LPAGRDLTDF LENVLTCHVC LDVCNIDPSC GFGSWRPSFR DRRAAGSDVD IDMAFILDSA2460
 2461 ETTTLFQFNE MKKYIAYLVR QLDMSPDPKA SQHFARVAVV QHAPSESVDN ASMPPVKVEF2520
 2521 SLTDYGSKEK LVDFLSRGMT QLQGTRALGS AIEYTIENVF ESAPNPRDLK IVVLMLTGEV2580
 2581 PEQQLEEAQR VILQAKCKGY FFVVLGIGRK VNIKEVYTFA SEPNDVFFKL VDKSTELNEE2640
 2641 PLMRFGRLLP SFVSSENAFY LSPDIRKQCD WFQGDQPTKN LVKFGHKQVN VPNNVTSSPT2700
 2701 SNPVTTMKPV TTTKPVTTTT KPVTTTTKPV TIINQPSVKP AAAKPAPAKP VAAKPVATKT2760
 2761 ATVRPPVAVR PAMAAKPVAA KPAAVRPPAA AAAKPVATKP EVPRPQAAKP AATKPATTKP2820
 2821 VVKMSREVQV FEITENSAKL HWERPEPPGP YFYDLTVTSA HDQSLVLKQN LTVTDRVIGG2880
 2881 LLAGQTYHVA VVCYLRSQVR ATYHGSFSTK KSQPPPPQPA RSASSSTINL MVSTEPLALT2940
 2941 ETDICKLPKD EGTCRDFILK WYYDPNTKSC ARFWYGGCGG NENKFGSQKE CEKVCAPVLA3000
 3001 KPGVISVMGT 

YRC Informatics Platform - Version 3.0
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