YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114577094
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLFTLVIT HPCRPHFARV RLLGPFRPSP AAPRSAATAR PGALPVSLSL SLSLFLSRAF  60
   61 LLLHREPENP ERTSPARQRM LSSEQVQFAS RKLQRYTGGG GGGGGRGGTS GQPDSPTTTS 120
  121 GPSPSPRDLR PSSAPPGALA FRSPNYAERA PRPERPSTRP PPAASSAAGP DRGRGAWPRG 180
  181 GGAGCRRLRA ASVLHGWYLC RVGGQAPASP PCPLARASPA ARRPEGAGPS GGVAALFRAV 240
  241 SSPSRGSLAR PPPPLSPPRG APGATMQAQQ LPYEFFSEEN APKWRGLLVP ALKKVQGQVH 300
  301 PTLESNDDAL QYVEELILQL LNMLCQAQPR SASDVEERVQ KSFPHPIDKW AIADAQSAIE 360
  361 KRKRRNPLSL PVEKIHPLLK EVLGYKIDHQ VSVYIVAVLE YISADILKLV GNYVRNIRHY 420
  421 EITKQDIKVA MCADKVLMDM FHQDVEDINI LSLTDEEPST SGEQTYYDLV KAFMAEIRQY 480
  481 IRELNLIIKV FREPFVSNSK LFSANDVENI FSRIVDIHEL SVKLLGHIED TVEMTDEGSP 540
  541 HPLVGSCFED LAEELAFDPY ESYARDILRP GFHDRFLSQL SKPGAALYLQ SIGEGFKEAV 600
  601 QYVLPRLLLA PVYHCLHYFE LLKQLEEKSE DQEDKECLKQ AITALLNVQS GMEKICSKSL 660
  661 AKRRLSESAC RFYSQQMKGK QLAIKKMNEI QKNIDGWEGK DIGQCCNEFI MEGTLTRVGA 720
  721 KHERHIFLFD GLMICCKSNH GQPRLPGASN AEYRLKEKFF MRKVQINDKD DTNEYKHAFE 780
  781 IILKDENSVI FSAKSAEEKN NWMAALISLQ YRSTLERMLD VTMLQEEKEE QMRLPSADVY 840
  841 RFAEPDSEEN IIFEENMQPK AGIPIIKAGT VIKLIERLTY HMYADPNFVR TFLTTYRSFC 900
  901 KPQELLSLII ERFEIPEPEP TEADRIAIEN GDQPLSAELK RFRKEYIQPV QLRVLNVCRH 960
  961 WVEHHFYDFE RDAYLLQRME EFIGTVRGKA MKKWVESITK IIQRKKIARD NGPGHNITFQ1020
 1021 SSPPTVEWHI SRPGHIETFD LLTLHPIEIA RQLTLLESDL YRAVQPSELV GSVWTKEDKE1080
 1081 INSPNLLKMI RHTTNLTLWF EKCIVETENL EERVAVVSRI IEILQVFQEL NNFNGVLEVV1140
 1141 SAMNSSPVYR LDHTFEQIPS RQKKILEEAH ELSEDHYKKY LAKLRSINPP CVPFFGIYLT1200
 1201 NILKTEEGNP EVLKRHGKEL INFSKRRKVA EITGEIQQYQ NQPYCLRVES DIKRFFENLN1260
 1261 PMGNSMEKEF TDYLFNKSLE IEPRNPKPLP RFPKKYSYPL KSPGVRPSNP RPGTMRHPTP1320
 1321 LQQEPRKISY SRIPESETES TASAPNSPRT PLTPPPASGA SSTTDVCSVF DSDHSSPFHS1380
 1381 SNDTVFIQVT LPHGPRSASV SSISLTKGTD EVPVPPPVPP RRRPESAPAE SSPSKIMSKH1440
 1441 LDSPPAIPPR QPTSKAYSPR YSLSDRTSIS DPPESPPLLP PREPVRTPDV FSSSPLHLQP1500
 1501 PPLGKKSDHG NAFFPNSPSP FTPPPPQTPS PHGTRRHLPS PPLTQEVDLH SIAGPPVPPR1560
 1561 QSTSQHIPKL PPKTYKREHT HPSMHRDGPP LLENAHSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle