YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114581253
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSGSGRRRS SLSPTMRPGT GAERGGLMVS EMESHPPSQG PGDGERRLSG SSLCSGSWVS  60
   61 ADGFLRRRPS MGHPGMHYAP MGMHPMGQRA NMPPVPHGMM PQMMPPMGGP PMGQMPGMMS 120
  121 SVMPGMMMSH MSQASMQPAL PPGVNSMDVA AGTASGAKSM WTEHKSPDGR TYYYNTETKQ 180
  181 STWEKPDDLK TPAEQLLSKC PWKEYKSDSG KPYYYNSQTK ESRWAKPKEL EDLEGYQNTI 240
  241 VAGSLITKSN LHAMIKAEES SKQEECTTTS TAPVPTTEIP TTMSTMAAAE AAAAVVAAAA 300
  301 AAAAAAAAAN ANASTSTSNT VSGTVPVVPE PEVTSIVATV VDNENTVTIS TEEQAQLTST 360
  361 PAIQDQSVEV SSNTGEETSK QETVADFTPK KEEEESQPAK KTYTWNTKEE AKQAFKELLK 420
  421 EKRVPSNASW EQAMKMIIND PRYSALAKLS EKKQAFNAYK VQTEKEEKEE ARSKYKEAKE 480
  481 SFQRFLENHE KMTSTTRYKK AEQMFGEMEV WNAISERDRL EIYEDVLFFL SKKEKEQAKQ 540
  541 LRKRNWEALK NILDNMANVT YSTTWSEAQQ YLMDNPTFAE DEELQNMDKE DALICFEEHI 600
  601 RALEKEEEEE KQKSLLRERR RQRKNRESFQ IFLDELHEHG QLHSMSSWME LYPTISSDIR 660
  661 FTNMLGQPGS TALDLFKFYV EDLKARYHDE KKIIKDILKD KGFVVEVNTT FEDFVAIISS 720
  721 TKRSTTLDAG NIKLAFNSLL EKAEARERER EKEEARKMKR KESAFKSMLK QAAPPIELDA 780
  781 VWEDIRERFV KEPAFEDITL ESERKRIFKD FMHVLEHECQ HHHQKNRTFS KKSKKHHRKR 840
  841 SRSRSGSDSD DDDSHSKKKR QRSESRSASE HSSSAESERS YKKSKKHKKK SKKRRHKSDS 900
  901 PESDAEREKD KKEKDRESEK DRTRQRSESK HKSPKKKTGK DSGNWDTSGS ELSEGELEKR 960
  961 RRTLLEQLDD DQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle