YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114578096
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNSETLERG VGGCRVSSGL GSYPGIEGAG LALLAGLALG GRLLGTHMSQ WHHPRSGWGR  60
   61 RRDFSGRSSA KKKGGNHIPE RWKDYLPVGQ RMPGTRFIAF KVPLQKSFEK KLAPEECFSP 120
  121 LDLFNKIREQ NEELGLIIDL TYTQRYYKPE DLPETVPYLK IFTVGHQVPD DETIFKFKHA 180
  181 VNGFLKENKD NDKLIGVHCT HGLNRTGYLI CRYLIDVEGV RPDDAIELFN RCRGHCLERQ 240
  241 NYIEDLQNGP IRKNWNSSVP RSSDFEDSAH LMQPVHNKPV KQGPRYNLHQ IQGHSAPRHF 300
  301 HTQTQNLQQS VRKFSENPHV YQRHHLPPPG PPGEDYSHRR YSWNVKPNAS RAAQDRRRWY 360
  361 PYNYSRLSYP ACWEWTQ

Type	Start	End	Confidence
Cytoplasmic	1	19	0.48
Transmembrane Helix	20	41	0.67
Non-Cytoplasmic	42	377	0.69