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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114581521
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTWVKIVFG VATSAVLALL VMCIVLRPSR VHNSEENTMR ALTLKDILNG TFSYKTFFPN  60
   61 WISGQEYLHQ SADNNIVLYN IETGQSYTIL SNRTMKSVNA SNYGLSPDRQ FVYLESDYSK 120
  121 LWRYSYTATY YIYDLSNGEF VRGNELPRPI QYLCWSPVGS KLAYVYQNNI YLKQRPGDPP 180
  181 FQITFNGREN KIFNGIPDWV YEEEMLATKY ALWWSPNGKF LAYAEFNDTD IPVIAYSYYG 240
  241 DEQYPRTINI PYPKAGAKNP VVRIFIIDTT YPAYVGPQEV PVPAMIASSD YYFSWLTWVT 300
  301 DERVCLQWLK RVQNVSVLSI CDFREDWQTW DCPKTQEHIE ESRTGWAEFP IPVPLVFSYD 360
  361 AISYYKIFSD KDGYKHIHYI KDTENAIQIT SGKWEAINIF RVTQDSLFYS SNEFEEYPGR 420
  421 RNIYRISIGS YPPSKKCVTC HLRKERCQYY TASFSDYAKY YALVCYGPGI PISTLHDGRT 480
  481 DQEIKILEEN KELENALKNI QLPKEEIKKL EVDEITLWYK MILPPQFDRS KKYPLLIQVY 540
  541 GGPCSQSVRS VFAVNWISYL ASKEGMVIAL VDGRGTAFQG DKLLYAVYRK LGVYEVEDQI 600
  601 TAVRKFIEMG FIDEKRIAIW GWSYGGYVSS LALASGTGLF KCGIAVAPVS SWEYYASVYT 660
  661 ERFMGLPTKD DNLEHYKNST VMARAEYFRN VDYLLIHGTA DDNVHFQNSA QIAKALVNAQ 720
  721 VDFQAMWYSD QNHGLSGLST NHLYTHMTHF LKQCFSLFQV LSQKEVFVQS KCMNNIRVVM 780
  781 EEKNLEVVLD FCHENSKYWN QQLRLSENIA PNSGHIAPPH TSGRDVLWWS GILDNTFPDS 840
  841 GLATAPLFFL HAMAVALRTR MRNLYCQRNI CEAKQSWRVY KSSTAWCRSA ELRTQSTSKV 900
  901 PKEGLLSLHL LCSTAHYQKT AEMKSIYFVA GLFVMLVQGS WQRSLQDTEE KSRSFSASQA 960
  961 DPLSDPDQMN EDKRHSQGTF TSDYSKYLDS RRAQDFVQWL MNTKRNSSVA YRHAEGTFTS1020
 1021 DVSSYLEGQA AKEFIAWLVK GRGRRE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle