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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114583943
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGPWVLLLL GLRLQLSLGI IPVEEENPDF WNRQAAEALG AAKKLQPAQT AAKNLIIFLG  60
   61 DGMGVSTVTA ARILKGQKKD KLGPETFLAM DRFPYVALSK TYSVDKHVPD SGATATAYLC 120
  121 GVKGNFQTIG LSAAARFNQC NTTRGNEVIS VMNRAKKAGK SVGVVTTTRV QHASPAGAYA 180
  181 HTVNRNWYSD ADVPASARQE GCQDIATQLI SNMDIDVILG GGRKYMFPMG TPDPEYPDDY 240
  241 SQGGTRLDGK NLVQEWLAKH QGARYVWNHT ELMQASLDPS VTHLMGLFEP GDMKYEIHRD 300
  301 SRIDHGHHES RAYRALTETI MFDDAIERAG QLTSEEDTLS LVTADHSHVF SFGGYPLRGS 360
  361 SIFGLAPGKA RDRKAYTVLL YGNGPGYVLK DGARPDVTES ESGDPEYRQQ SAVPLDGETH 420
  421 AGEDVAVFAR GPQAHLVHGV QEQTFIAHWV MSVPDSEEEN PAFWNRQAAE ALDAAKKLQP 480
  481 IQKVAKNLIL FLGDGLGVPT VTATRILKGQ KNGKLGPETP LAMDRFPYLA LSKTYNVDRQ 540
  541 VPDSAATATA YLCGVKANFQ TIGLSAAARF NQCNTTRGNE VISVMNRAKQ AGKSVGVVTT 600
  601 TRVQHASPAG TYAHTVNRNW YSDADMPASA RQDGCQDIAT QLISNMDIDV ILGGGRKYMF 660
  661 PMGTPDPEYP GDASQNGIRL DGKNLVQEWL AKHQGAWYVW NRTELVQASL DPSVTHLMGL 720
  721 FEPGDTKYEI HRDPTLDPSL MEMTEAALRL LSRNPRGFFL FVEGGRIDHG HHEGVAYQAL 780
  781 TEAVMFDDAI ERAGQLTSEE DTLTLVTADH SHVFSFGGYT LRGSSIFGLA PSKAQDSKAY 840
  841 TSILYGNGPG YVFNSGVRPD VNESESGDPD YQQQAAVPLS SETHGGEDVA VFARGPQAHL 900
  901 VHGVQEQSFV AHVMAFAACL EPYTACDLAP PACPTDAAHP VAASLPLLAG TLLLLGASAA 960
  961 P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle