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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114582567
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTALECEVT IKPRFVYIPS PRTGPVRGGD CESRDGVGVE RENRTGETGL VPSGMRALGF  60
   61 PQLLQSAAAS RSRARGGQSV GRRGSSCAVW AAAGRGIGSR RRPLRVRSLA PPSPSCGGKI 120
  121 EMKVHMHTKF CLICLLTFIF HHCNHCHEEH DHGPEALHRQ HRGMTELEPS KFSKQAAENE 180
  181 KKYYIEKLFE RYGENGRLSF FGLEKLLTNL GLGERKVVEI NHEDLGHDHV SHLDILAVQE 240
  241 GKHFHSHNHQ HSHNHLNSEN QTVTSVSTKR NYKCDPEKET IEVSVKSDDK HMHDHNHRLR 300
  301 HHHRLHHHLD HNNTHHFHND SITPSERGEP SNEPSTETNK TQEQSDVKLP KGKRKKKGRK 360
  361 SNENSEVITP GFPPNHDQGE QYEHNRVHKP DRVHNPGHSH VHLPERNGHD PGRGHQDLDP 420
  421 DNEGELRHTR KREAPHVKNN AIISLRKDLN EDDHHHECLN VTQLLKYYGH GANSPISTDL 480
  481 FTYLCPALLY QIDSRLCIEH FDKLLVEDIN KDKNLVPEDE ANIGASAWIC GIISITVISL 540
  541 LSLLGVILVP IINQGCFKFL LTFLVALAVG TMSGDALLHL LPHSQGGHDH SHQHAHGHGH 600
  601 SHGHESNKFL EEYDAVLKGL VALGGIYLLF IIEHCIRMFK HYKQQRGKQK WFMKQNTEES 660
  661 TIGRKLSDHK LNNTPDSDWL QLKPLAGTDD SVVSEDRLNE TELTDLEGQQ ESPPKNYLCI 720
  721 EEEKIIDHSH SDGLHTIHEH DLHAAAHNHH GENKTVLRKH NHQWHHKHSH HSHGPCHSGS 780
  781 DLKETGIANI AWMVIMGDGI HNFSDGLAIG AAFSAGLTGG ISTSIAVFCH ELPHELGDFA 840
  841 VLLKAGMTVK QAIVYNLLSA MMAYIGMLIG TAVGQYANNI TLWIFAVTAG MFLYVALVDM 900
  901 LPEMLHGDGD NEEHGFCPVG QFILQNLGLL FGFAIMLVIA LYEDKIVFDI QF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle