YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114571717
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFKKEPAAS AAAFPSQRTS WGFLQSLVSI KQEKPADPEE QQSHHHHHHH HHYGGLFAGA  60
   61 EERSPGLEGG EGGSHGVIQD LSILHQHVQQ QPAQHHRDVL LSSSSRTDDH HGTEEPKQDT 120
  121 NVKKAKRPKP ESQGIKAKRK PSASSKPSLV GDGEGAILSP SQKPHICDHC SAAFRSSYHL 180
  181 RRHVLIHTGE RPFQCSQCSM GFIQKYLLQR HEKIHSREKP FGCDQCSMKF IQKYHMERHK 240
  241 RTHSGEKPYK CDTCQQYFSR TDRLLKHRRT CGEVIVKGAT SAEPGSSNHN NMGNLAVLSQ 300
  301 GNTSSSRRKT KSKSIAIENK EQKTGKTNES QISNNINMQS YSVEMPTVSS SGGIIGTGID 360
  361 ELQKRVPKLI FKKGSRKNTD KNYLNFVSPL PDIVGQKSLS GKPSGSLGIV SNNSVETIGL 420
  421 LQSTSGKQGQ ISSNYDDAMQ FSKKRRYLPT ASSNSAFSIN VGHMVSQQSV IQSAGVSVLD 480
  481 NEAPLSLIDS SALNAEIKSC HDKSGIPDEV LQSILDQYSN KSESQKEDPF NIAEPRVDLH 540
  541 TSGEHSELVQ EENLSPGTQT PSNDKASMLQ EYSKYLQQAF EKSTNASFTL GHGFQFVSLS 600
  601 SPLHNHTLFP EKQIYTTSPL ECGFGQSVTS VLPSSLPKPP FGMLFGSQPG LYLSALDATH 660
  661 QQLTPSQELD DLIDSQKNLE TSSAFQSSSQ KLTSQKEQKN LESSTGFQIP SQELASQIDP 720
  721 QKDIEPRTTY QIENFAQAFG SQFKSGSRVP MTFITNSNGE VDHRVRTSVS DFSGYTNMMS 780
  781 DVSEPCSTRV KTPTSQSYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle