YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114572230
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTEGAFPHR SACSLPLIHV HTHIHVCVPV LWGSVPWGMK LQCVSLWLLG TILILCSVDN  60
   61 HGLRRCLIST DMHHIEESFQ EIKRAIQAKD TFPNVTILST LETLQIIKPL DVCCVTKNLL 120
  121 EFYVDRVFKD HQEPNPKILR KVSSIANSFL YMQKTLQQCQ EQRQCHCRQE ATNATRVIHD 180
  181 NYDQLEVRAA AIKSLGELDV FLAWINKNHE VTSSA

Type	Start	End	Confidence
Cytoplasmic	1	16	0.52
Transmembrane Helix	17	33	0.55
Non-Cytoplasmic	34	42	0.62
Transmembrane Helix	43	63	0.68
Cytoplasmic	64	215	0.69