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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114572305
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVARPRVPA ALPLLGELPR LLLLVLLCLP AVWGDCGLPP EVPNAQPALE GRTSFPEDTV  60
   61 ITYKCEESFV KIPGEKDSVI CLKGSQWSDI EEFCNRSCEV PTRLNSASLK QPYITQNYFP 120
  121 VGTVVEYECR PGYRREPSLS TKLTCLQNLK WSTAVEFCKK KSCPNPGEIR NGQIDVPDGI 180
  181 LFGATISFSC NTGYKLFGST SSFCLISGSS VQWSDPLPEC REIHCPAPPQ IDNGIIQGER 240
  241 DHYGYRQSVT YACNKGFTMI GEHSIYCTVN NDEGEWSGPP PECRGKSLTS KVPPTVQKPT 300
  301 TVNVPTTEVS PTSQKTTTKT TTPNAQGTET PSVLQKHTTE NVSAKRTPPT PQKPTTVNVL 360
  361 ATIVTPTPQK PTTINVPATG VSSTPQRHTI VNVSATGTLP TLQKPTRAND SATKSPAAAQ 420
  421 TSFISKTLST KTPSAAQNPM MTNASATQAT LTAQRFTTAK VAFTQSPPAA RKSTNVHSPV 480
  481 TNGLKSTQRF PSAHITATRS TPVSRTTKHF HETTPNKGSG TTSGTTRLLS GHTCFTLTGL 540
  541 LGMLVTVGLL T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle