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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114568425
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISWEVVHTV FLFALLYSSL AQDASPQSEI RAEEIPEGAS TLAFVFDVTG SMYDDLVQVI  60
   61 EGASKILETS LKRPKRPLFN FALVPFHDPE IGPVTITTDP KKFQYELREL YVQGGGDCPE 120
  121 MSIGAIKIAL EISLPGSFIY VFTDARSKDY RLTHEVLQLI QQKQSQVVFV LTGDCDDRTH 180
  181 IGYKVYEEIA STSSGQVFHL DKKQVNEVLK WVEEAVQASK VHLLSTDHLE QAVNTWRIPF 240
  241 DPSLKEVTVS LSGPSPMIEI RSPLGKLIKK GFGLHELLNI HNSAKVVNVK EPEAGMWTVK 300
  301 TSSSGRHSVR ITGLSTIDFR AGFSRKPTLD FKKTVSRPVQ GIPTYVLLNT SGISTPARID 360
  361 LLELLSISGS SLKTIPVKYY PDRKPYGIWN ISDFVPPNEA FFLKVTGYDK DDYLFQRVSS 420
  421 VSFSNIVPDA PKVTMPEKTP GYYLQPGQIP CSVDSLLPFT LSFVRNGVTL GVDQYLKESA 480
  481 SVNLDIEKVI LSDEGFYECI AVSSAGTGRA QTFFDVSEPP PVIQVPNNVT VTPGERAVLT 540
  541 CLIISAVDYN LTWQRNDRDV RLAEPARIRT LANLSLELTS VKFNDAGEYH CMVSSEGGSS 600
  601 AASVFLTVQE PPKVTVMPKN QSFTGGSEVS VMCSATGYPK PKIAWTVNDM FIVGSHRYRM 660
  661 TSDGTLFIKN AAPKDAGIYG CLASNSAGTD KQNSTLRYIE APKLMVVQSE LLVALGDITV 720
  721 MECKTSGIPP PQVKWFKGDL ELRPSTFLII DPLLGLLKIQ ETQDLDAGDY TCVAINEAGR 780
  781 ATGKITLDVG SPPVFIQEPA DVSMEIGSNV TLPCYVQGYP EPTVKWRRLD NMPIFSRPFS 840
  841 VSSISQLRTG ALFILNLWAS DKGTYICEAE NQFGKIQSET TVTVTGLVAP LIGISPSVAN 900
  901 VIEGQQLTLP CTLLAGNPIP ERRWIKNSAM LLQNPYITVR SDGSLHIERV QLQDGGEYTC 960
  961 VASNVAGTNN KTTSVVVHVL PTIQHGQQIL STIEGIPVTL PCKASGIPKP SVIWSKKGEL1020
 1021 ISTSGAKFSA GADGSLYVVS PGGEESGEYV CTATNAAGYA KRKVQLTVYV RPRVFGDQRG1080
 1081 LSQDKPVEIS VLAGEEVTLP CEVKSLPPPI ITWAKETQLI SPFSPRHTFL PSGSMKITET1140
 1141 RTSDSGMYLC VATNIAGNVT QAVKLNVHVP PKIQRGPKHL KVQVGQRVDI PCNAQGTPLP1200
 1201 VITWSKGGST MLVDGEHHVS NPDGTLSIDQ ATPSDAGIYT CVATNIAGTD ETEITLHVQE1260
 1261 PPTVEDLEPP YNTPFQERVA NQRIAFPCPA KGTPKPTIKW LHNGRELTGR EPGISILEDD1320
 1321 TLLVIASVTP YDNGEYICVA VNEAGTTERK YNLKVHVPPV IKDKEQVTNV SVLLNQLTNL1380
 1381 FCEVEGTPSP IIMWYKDNVQ VTESSTIQIV NNGKILKLFK ATPEDAGRYS CKAINIAGTS1440
 1441 QKYFNIDVLV PPTIIGTNFP NEVSVVLNRD VALECQVKGT PFPDIHWFKD GKPLFLGDPN1500
 1501 VELLDRGQVL HLKNARRNDK GRYQCTVSNA AGKQAKDIKL TIYIPPSIKG GNVTTDISVL1560
 1561 INSLIKLECE TRGLPMPAIT WYKDGQPIMS SSQALYIDKG QYLHIPRAQV SDSATYTCHV1620
 1621 ANVVGTAEKS FHVDVYVPPM IEGNLAMPLN KQVVIAHSLT LECKAAGNPS PILTWLKDGV1680
 1681 PVKANDNIRI EAGGKKLEIL NAQEIDRGQY ICVATSVAGE KEIKYEVDVL VPPAIEGGDE1740
 1741 TSYFIVMVNN LLELDCHVTG SPPPTIMWLK DGQLIDERDG FKILLNGRKL VIAQAQVSDT1800
 1801 GLYWCMAANT AGDHKKEFEV TVHVPPTIKS SGLSERVVVK YKPVALQCIA NGIPNPSITW1860
 1861 LKDDQPVNTA QGNLKIQSSG RVLQIAKTLL EDAGRYTCVA TNAAGETQQH IQLHVHEPPS1920
 1921 LEDAGKMLNE TVLVSNPVQL ECKAAGNPVP VITWYKDNRL LSGSTSMTFL NRGQIIDIES1980
 1981 AQISDAGIYK CVAINSAGAT ELFYSLQVHV APSISGSNNM VAVVVNNPVR LECEARGIPA2040
 2041 PSLTWLKDGS PVSSFSNGLQ VLSGGRILAL TSAQISDTGR YTCVAVNAAG EKQRDIDLRV2100
 2101 YVPPNIMGEE QNVSVLISQA VELLCQSDAI PPPTLTWLKD GHPLLKKPGL SISENGSVLK2160
 2161 IEDAQVQDTG RYTCEATNVA GKTEKNYNVN IWVPPNIGGS DELTQLTVIE GNLISLLCES2220
 2221 SGIPPPNLIW KKKGSPVLTD SMGRVRILSG GRQLQISVAE KSDAALYSCV ASNVAGTAKK2280
 2281 EYNLQVYIRP TITNSGSHPT EIIVTRGKSI SLECEVQGIP PPTVTWMKDG RPLIKAKGVE2340
 2341 ILDEGHILQL KNIHVSDTGR YVCVAVNVAG MTDKKYDLSV HAPPSIIGNH RSPENISVVE2400
 2401 KNSVSLTCEA SGIPLPSITW FKDGWPVSLS NSVRILSGGR MLRLMQTTME DAGQYTCVVR2460
 2461 NAAGEERKIF GLSVLVPPHI VGENTLEDVK VKEKQSVMLT CEVTGNPVPE ITWHKDGQPL2520
 2521 QEDEAHHIIS GGRFLQITNV QVPHTGRYTC LASSPAGDKS RSFSLNVFVS PTIAGVGSDG2580
 2581 NPEDVTVILN SPTSLVCEAY SYPPATITWF KDGTPLESNR NIRILPGGRT LQILNAQEDN2640
 2641 AGRYSCVATN EAGEMIKHYE VKVYIPPIIN KGDLWGPGLS PKEVKIKVNN TLTLECEAYA2700
 2701 IPSASLSWYK DGQPLKSDDH VNIAANGHTL QIKEAQISDT GRYTCVASNI AGEDELDFDV2760
 2761 NIQVPPSFQK LWEIGNMLDT GRNGEAKDVI INNPISLYCE TNAAPPPTLT WYKDGHPLTS2820
 2821 SDKVLILPGG RVLQIPRAKV EDAGRYTCVA VNEAGEDSLQ YDVRVLVPPI IKGANSDLPE2880
 2881 EVTVLVNKSA LIECLSSGSP APRNSWQKDG QPLLEDDHHK FLSNGRILQI LNTQITDIGR2940
 2941 YVCVAENTAG SAKKYFNLNV HVPPSVIGPK SENLTVVVNN FISLTCEVSG FPPPDLSWLK3000
 3001 NEQPIKLNTN TLIVPGGRTL QIIRAKVSDG GEYTCIAINQ AGESKKKFSL TVYVPPSIKD3060
 3061 HDSESLSVVN VREGTSVSLE CESNAVPPPV ITWYKNGRMI TESTHVEILA DGQMLHIKKA3120
 3121 EVSDTGQYVC RAINVAGRDD KNFHLNVYVP PSIEGPEREV IVETISNPVT LTCDATGIPP3180
 3181 PTIAWLKNHK RIENSDSLEV HILSGGSKLQ IARSQLSDSG NYTCIASNME GKAQKYYFLS3240
 3241 IQVPPSVAGA EIPSDVSVLL GENVELVCNA NGIPTPLIQW LKDGKPIASG ETERIRVSAN3300
 3301 GSTLNIYGAL TSDTGKYTCV ATNPAGEEDR IFNLNVYVTP TIGGNKDEAE KLMTLVDTSI3360
 3361 NIECRATGTP PPQINWLKNG LPLPLSSHIR LLAAGQVIRI VRAQVSDVAV YTCVASNRAG3420
 3421 VDNKHYNLQV FAPPNMDNSM RTEEITVLKG SSTSMACITD GTPAPSMAWL RDGQPLGLDA3480
 3481 HLTVSTHGMV LQLLKAETED SGKYTCIASN EAGEVSKHFI LKVLEPPHIN GSEEHEEISV3540
 3541 IVNNPLELTC IASGIPAPKM TWMKDGRPLP QTDQVQTLGG GEVLRISTAQ VEDTGRYTCL3600
 3601 ASSPAGDDDK EYLVRVHVPP NIAGTDEPQD ITVLRNRQVT LECKSDAVPP PVITWLRNGE3660
 3661 RLQATPRVRI LSGGRYLQIN NADLGDTANY TCVASNIAGK TTREFILTVN VPPNIKGGPQ3720
 3721 SLVILLNKST VLECIAEGVP TPRITWRKDG AVLAGNHARY SILENGFLHI QSAHVTDTGR3780
 3781 YLCMATNAAG TDRRRIDLQV HVPPSIAPGP TNMTVIVNVQ TTLACEATGI PKPSINWRKN3840
 3841 GHLLNVDQNQ NSYRLLSSGS LVIISPSVDD TATYECTVTN GAGDDKRTVD LTVQVPPSIA3900
 3901 DEPTDFLVTK HAPAVITCTA SGVPFPSIHW TKNGIRLLPR GDGYRILSSG AIEILATQLN3960
 3961 HAGRYTCVAR NAAGSAHRHV TLHVHEPPVI QPQPSELHVI LNNPILLPCE ATGTPSPFIT4020
 4021 WQKEGINVNT SGRNHAVLPS GGLQISRAVR EDAGTYMCVA QNPAGTALGK IKLNVQVPPV4080
 4081 INPHLKEYVI AVDKPITLSC EADGLPPPDI TWHKDGRAIV ESIRQRVLSS GSLQIAFVQP4140
 4141 GDAGHYTCMA ANVAGSSSTS TKLTVHVPPR IRSTEGHYTV NENSQAILPC VADGIPTPAI4200
 4201 NWKKDNVLLA NLLGKYTAEP YGELILENVV LEDSGFYTCV ANNAAGEDTH TVSLTVHVLP4260
 4261 TFTELPGDVS LNKGEQLRLS CKATGIPLPK LTWTFNNNII PAHFDSVNGH SELVIERVSK4320
 4321 EDSGTYVCTA ENSVGFVKAI GFVYVKEPPV FKGDYPSNWI EPLGGNAILN CEVKGDPTPT4380
 4381 IQWNRKGVDI EISHRIRQLG NGSLAIYGTV NEDAGDYTCV ATNEAGVVER SMSLTLQSPP4440
 4441 IITLEPVETV INAGGKIILN CQATGEPQPT ITWSRQGHSI SWDDRVNVLS NNSLYIADAQ4500
 4501 KEDTSEFECV ARNLMGSVLV RVPVIVQVHG GFSQWSAWRA CSVTCGKGIQ KRSRLCNQPL4560
 4561 PANGGKPCQG SDLEMRNCQN KPCPVDGSWS EWSLWEECTR SCGRGNRTRT RTCNNPSVQH4620
 4621 GGRPCEGNAV EIIMCNIRPC PVHGAWSAWQ PWGTCSESCG KGTQTRARLC NNPPPAFGGS4680
 4681 YCDGAETQMQ VCNERHCPIH GKWATWASWS ACSVSCGGGA RQRTRDCSDP VPQYGGRKCE4740
 4741 GSDVQSDFCN SDPCPTHGNW SPWSGWGTCS RTCNGGQMRR YRTCDNPPPS NGGRACGGPD4800
 4801 SQIQRCNTDM CPVDGSWGSW HSWSQCSASC GGGEKTRKRL CDHPVPIKGG RPCPGDTTQV4860
 4861 TRCNVQACPG GPQRARGSVI GNINDVEFGI AFLNATITDS PNSDTRIIRA KITNVPHSLG4920
 4921 SAMRKIVSIL NPIYWTTAKE IGEAVNGFTL TNAVFKRETQ VEFATGEILQ MSHIARGLDS4980
 4981 DGALLLDIVV SGYVLQLQSP AEVTVKDYTE DYIQTGPGQL YAYSTRLFTI DGISIPYTWN5040
 5041 HTVFYDQAQG RMPFLVETLH ASSVESDYNQ IEETLGFKIH ASISKGDRSN QCPSGFTLDS5100
 5101 VGPFCADEDE CAAGNPCSHT CHNAMGTYYC SCPKGLTIAA DGRTCQDIDE CALGRHTCHA5160
 5161 GQDCDNTIGS YRCVVRCGSG FRRTSDGLSC QDINECQESS PCHQRCFNAI GSFHCGCEPG5220
 5221 YQLKGRKCMD VNECRQNVCR PDQHCKNTRG GYKCIDLCPN GMTKAENGTC IDIDECKDGT5280
 5281 HQCRYNQICE NTRGSYRCVC PRGYRSQGVG RPCMDINECE QVPKPCAHQC SNTPGSFKCI5340
 5341 CPPGQHLLGD GKSCAGLERL PNYGTQYSSY NLARFSPVRN NYQPQQHYRQ YSHLYSSYSE5400
 5401 YRNSRTSLSR TRRTIRKTCP EGSEASHDTC IDIDECENTD ACQHECKNTF GSYQCICPPG5460
 5461 YQLTHNGKTC QDIDECLEQN VHCGPNRMCF NMRGSYQCID TPCPPNYQRD PVSGFCLKNC5520
 5521 PPNDLECALS PYALEYKLVS LPFGIATNQD LIRLVAYTQD GVMHPRTTFL MVDEEQTVPF5580
 5581 ALRDENLKGV VYTTRPLREA ETYRMRVRAS SYSANGTIEY QTTFIVYIAV SAYPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle