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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18860894
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHVARLLLL LLTFFLRTDA ETPPRFTRTP VDQTGVSGGV ASFICQATGD PRPKIVWNKK  60
   61 GKKVSNQRFE VIEFDDGSGS VLRIQPLRTP RDEAIYECVA SNNVGEISVS TRLTVLREDQ 120
  121 IPRGFPTIDM GPQLKVVERT RTATMLCAAS GNPDPEITWF KDFLPVDTSN NNGRIKQLRS 180
  181 ESIGGTPIRG ALQIEQSEES DQGKYECVAT NSAGTRYSAP ANLYVRELRE VRRVPPRFSI 240
  241 PPTNHEIMPG GSVNITCVAV GSPMPYVKWM LGAEDLTPED DMPIGRNVLE LNDVRQSANY 300
  301 TCVAMSTLGV IEAIAQITVK ALPKPPGTPV VTESTATSIT LTWDSGNPEP VSYYIIQHKP 360
  361 KNSEELYKEI DGVATTRYSV AGLSPYSDYE FRVVAVNNIG RGPPSEPVLT QTSEQAPSSA 420
  421 PRDVQARMLS STTILVQWKE PEEPNGQIQG YRVYYTMDPT QHVNNWMKHN VADSQITTIG 480
  481 NLVPQKTYSV KVLAFTSIGD GPLSSDIQVI TQTGVPGQPL NFKAEPESET SILLSWTPPR 540
  541 SDTIANYELV YKDGEHGEEQ RITIEPGTSY RLQGLKPNSL YYFRLAARSP QGLGASTAEI 600
  601 SARTMQSMFA KNFHVKAVMK TSVLLSWEIP ENYNSAMPFK ILYDDGKMVE EVDGRATQKL 660
  661 IVNLKPEKSY SFVLTNRGNS AGGLQHRVTA KTAPDVLRTK PAFIGKTNLD GMITVQLPEV 720
  721 PANENIKGYY IIIVPLKKSR GKFIKPWESP DEMELDELLK EISRKRRSIR YGREVELKPY 780
  781 IAAHFDVLPT EFTLGDDKHY GGFTNKQLQS GQEYVFFVLA VMEHAESKMY ATSPYSDPVV 840
  841 SMDLDPQPIT DEEEGLIWVV GPVLAVVFII CIVIAILLYK RKRAESDSRK SSIPNNKEIP 900
  901 SHHPTDPVEL RRLNFQTPGM ASHPPIPILE LADHIERLKA NDNLKFSQEY ESIDPGQQFT 960
  961 WEHSNLEVNK PKNRYANVIA YDHSRVLLSA IEGIPGSDYV NANYIDGYRK QNAYIATQGS1020
 1021 LPETFGDFWR MIWEQRSATV VMMTKLEERS RVKCDQYWPS RGTETHGLVQ VTLLDTVELA1080
 1081 TYCVRTFALY KNGSSEKREV RQFQFTAWPD HGVPEHPTPF LAFLRRVKTC NPPDAGPMVV1140
 1141 HCSAGVGRTG CFIVIDAMLE RIKHEKTVDI YGHVTLMRAQ RNYMVQTEDQ YIFIHDALLE1200
 1201 AVTCGNTEVP ARNLYAYIQK LTQIETGENV TGMELEFKRL ASSKAHTSRF ISANLPCNKF1260
 1261 KNRLVNIMPY ESTRVCLQPI RGVEGSDYIN ASFIDGYRQQ KAYIATQGPL AETTEDFWRM1320
 1321 LWEHNSTIVV MLTKLREMGR EKCHQYWPAE RSARYQYFVV DPMAEYNMPQ YILREFKVTD1380
 1381 ARDGQSRTVR QFQFTDWPEQ GVPKSGEGFI DFIGQVHKTK EQFGQDGPIS VHCSAGVGRT1440
 1441 GVFITLSIVL ERMRYEGVVD IFQTVKMLRT QRPAMVQTED QYQFSYRAAL EYLGSFDHYA1500
 1501 T

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