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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114560633
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAGGGSVA DPGSRGLLRL LSFCVLLAGL FLDFEPDPLP LCPDVSFFPQ PQPPTPQSKG  60
   61 TGLCRGNSVE RKIYIPLNKT APCVRLLNAT HQIGCQSSIS GDTGVIHVVE KEEDLQWVLT 120
  121 DGPNPPYMVL LESKHFTRDL MEKLKGRTSR IAGLAVSLTK PSPASGFSPS VQCPNDGFGV 180
  181 YSNSYGPEFA HCREIQWNSL GNGLAYEDFS FPIFLLEDEN ETKVIKQCYQ DHNLSQNGSA 240
  241 PTFPLCAMQL FSHMHAVIST ATCMRRSSIQ STFSINPEIV CDPLSDYNVW SMLKPINTTG 300
  301 TLKPDDRVVV AATRLDSRSF FWNVAPGAES AVASFVTQLA AAEALQKAPD VTTLPRNVMF 360
  361 VFFQGETFDY IGSSRMVYDM EKGKFPVQLE NVDSFVELGQ VALRTSLELW MHTDPVSQKN 420
  421 ESVRNQVEDL LATLEKSGAG VPAVILRRTN QSQPLPPSSL QRFLRARNIS GVVLADHSGA 480
  481 FHNKYYQSIY DTAENINVSY PEWLSPEEDL NFVTDTAKAL ADVATVLGRA LYELAGGTNF 540
  541 SDTVQADPQT VTRLLYGFLI KANNSWFQSI LRQDLRSYLG DGPLQHYIAV SSPTNTTYVV 600
  601 QYALANLTGT VVNLTREQCQ DPSKVPSENK DLYEYSWVQG PLHSNETDRL PRCVRSTARL 660
  661 ARALSPAFEL SQWSSTEYST WTESRWKDIR ARIFLIASKE LELITLTVGF GILIFSLIVT 720
  721 YCINAKADVL FIAPREPGAV SY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle