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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114558784
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKPQSAVE PGISGESGGF LGPPREPKAV LEMLPRHSES TKRLGRPSAG GRGAWIPQRG  60
   61 GVPQSGAGCN HTRAPAPSSI PESQRRSPKR WKSRSAHDFW CRVGGDWGSP VPRPYRTHCG 120
  121 PPGPYIVGRD KYEPAAVSEQ GDKKGKKGKK DRDMDELKKE VSMDDHKLSL DELHRKYGTD 180
  181 LSRGLTSARA AEILARDGPN ALTPPPTTPE WIKFCRQLFG GFSMLLWIGA ILCFLAYSIQ 240
  241 AATEEEPQND NLYLGVVLSA VVIITGCFSY YQEAKSSKIM ESFKNMVPQQ ALVIRNGEKM 300
  301 SINAEEVVVG DLVEVKGGDR IPADLRIISA NGCKVDNSSL TGESEPQTRS PDFTNENPLE 360
  361 TRNIAFFSTN CVEGTARGIV VYTGDRTVMG RIATLASGLE GGQTPIAAEI EHFIHIITGV 420
  421 AVFLGVSFFI LSLILEYTWL EAVIFLIGII VANVPEGLLA TVTVCLTLTA KRMARKNCLV 480
  481 KNLEAVETLG STSTICSDKT GTLTQNRMTV AHMWFDNQIH EADTTENQSG VSFDKTSATW 540
  541 LALSRIAGLC NRAVFQANQE NLPILKRAVA GDASESALLK CIELCCGSVK EMRERYAKIV 600
  601 EIPFNSTNKY QLSIHKNPNT SEPRHLLVMK GAPERILDRC SSILLHGKEQ PLDEELKDAF 660
  661 QNAYLELGGL GERVLGFCHL FLPDEQFPEG FQFDTDDVNF PIDNLCFVGL ISMIDPPRAA 720
  721 VPDAVGKCRS AGIKVIMVTG DHPITAKAIA KGVGIISEGN ETVEDIAARL NIPVSQVNPR 780
  781 DAKACVVHGS DLKDMTSEQL DDILKYHTEI VFARTSPQQK LIIVEGCQRQ GAIVAVTGDG 840
  841 VNDSPALKKA DIGVAMGIAG SDVSKQAADM ILLDDNFASI VTGVEEGRLI FDNLKKSIAY 900
  901 TLTSNIPEIT PFLIFIIANI PLPLGTVTIL CIDLGTDMVP AISLAYEQAE SDIMKRQPRN 960
  961 PKTDKLVNER LISMAYGQIG MIQALGGFFT YFVILAENGF LPIHLLGLRV DWDDRWINDV1020
 1021 EDSYGQQWTY EQRKIVEFTC HTAFFVSIVV VQWADLVICK TRRNSVFQQG MKNKILIFGL1080
 1081 FEETALAAFL SYCPGMGVAL RMYPLKPTWW FCAFPYSLLI FVYDEVRKLI IRRRPGGWVE1140
 1141 KETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle