YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114555754
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAAPNPPV AVSGASYAAA AVTMAHYKVR GARRGWGHAG GSKPLVGSGW EWGRACRFGR  60
   61 EGPEVARRRR GCRTPSAFFL LGSRALATDP RCLFRPPTRS RGEGGETDGA RPGGADSLKP 120
  121 RILLMGLRRT FKSSIQKVVF HKMSPNETLF LESTNKIYKD DISNSSFVNF QIWDFPGQMD 180
  181 FFDPTFDYEM IFRGTGALIY VIDAQDDYME ALTRLHITVS KAYKVNPDMN FEVFIHKVDG 240
  241 LSDDHKIETQ RDIHQRANDD LADAGLEKLH LSFYLTSIYD HSIFEAFSKV VQKLIPQLPT 300
  301 LENLLNIFIS NSGIEKAFLF DVVSKIYIAT DSSPVDMQSY ELCCDMIDVV IDVSCIYGLK 360
  361 EDGSGSAYDK ESMAIIKLNN TTVLYLKEVT KFLALVCILR EESFERKGLI DYNFHCFRKA 420
  421 IHEVFEVGVT SHRSCGHQTS ASSLKALTHN GTPRNAI

Type	Start	End	Confidence
Signal Peptide	1	25	0.85
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	457	0.99